miRNEST 2.0, an integrative microRNA resource :: BLAST
>41874_far-MIR171:mirbase
Length = 130
Score = 252 bits (127), Expect = 6e-68
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 13 gagtgcgatgttggcatggttcaatcaacaatcgagtggtctctgcatagcttccttgct 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtgcgatgttggcatggttcaatcaacaatcgagtggtctctgcatagcttccttgct 60
Query: 73 agcgtggtggcatgctgctttgcttgatctgattgagccgtgccaatatcgcaagcttcc 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcgtggtggcatgctgctttgcttgatctgattgagccgtgccaatatcgcaagcttcc 120
Query: 133 tgcctag 139
|||||||
Sbjct: 121 tgcctag 127
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 81.8 bits (41), Expect = 1e-16
Identities = 111/132 (84%), Gaps = 3/132 (2%)
Strand = Plus / Plus
Query: 1 tactggcttggagagtgcgatgttggcatggttcaatcaacaatcgagtggtctctgcat 60
|||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 14 tactggctgggagagtgcgatgttggcacggttcaatca--aatcgggtggtctctgcat 71
Query: 61 -agcttccttgctagcgtggtggcatgctgctttgcttgatctgattgagccgtgccaat 119
|| ||||| ||| | || ||| || || ||| |||||||||||||||||||||
Sbjct: 72 gcactggcttgcgagcaagctgcgatgatgtttcgctccatctgattgagccgtgccaat 131
Query: 120 atcgcaagcttc 131
||||||||||||
Sbjct: 132 atcgcaagcttc 143
>41986_osa-MIR171f:mirbase
Length = 127
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 10 ggagagtgcgatgttggcatggttcaatcaa 40
|||||||||||||||||||||||||||||||
Sbjct: 2 ggagagtgcgatgttggcatggttcaatcaa 32
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 91 tttgcttgatctgattgagccgtgccaatatcgcaagctt 130
|||| ||| ||||||||||||||||||||||| |||||||
Sbjct: 86 tttgtttggtctgattgagccgtgccaatatcacaagctt 125
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 gagagtgcgatgttggcatggttcaatcaa 40
||||||||||||||||||||||||||||||
Sbjct: 13 gagagtgcgatgttggcatggttcaatcaa 42
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatcgcaagcttc 131
||||||||||||||||||||| ||| ||||
Sbjct: 122 tgattgagccgtgccaatatcacaaccttc 151
>42766_zma-MIR171f:mirbase
Length = 155
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 gagagtgcgatgttggcatggttcaatcaac 41
||||||||||||||||||||| |||||||||
Sbjct: 16 gagagtgcgatgttggcatggctcaatcaac 46
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatcgcaagcttc 131
||||||||||||||||||||| ||| ||||
Sbjct: 115 tgattgagccgtgccaatatcacaaccttc 144
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 99 atctgattgagccgtgccaatatcgca 125
|||||||||||||||||||||||||||
Sbjct: 62 atctgattgagccgtgccaatatcgca 88
>42769_zma-MIR171i:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 gagagtgcgatgttggcatggttcaatcaa 40
|||||||||||||||||| |||||||||||
Sbjct: 13 gagagtgcgatgttggcacggttcaatcaa 42
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatcgcaagcttc 131
||||||||||||||||||||| ||| ||||
Sbjct: 65 tgattgagccgtgccaatatcacaaccttc 94
>40361_rco-MIR171c:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 99 atctgattgagccgtgccaatatcgc 124
||||||||||||||||||||||||||
Sbjct: 59 atctgattgagccgtgccaatatcgc 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 gatgttggcatggttcaatcaa 40
||||||||||||||||||||||
Sbjct: 4 gatgttggcatggttcaatcaa 25
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 99 atctgattgagccgtgccaatatc 122
||||||||||||||||||||||||
Sbjct: 66 atctgattgagccgtgccaatatc 89
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 99 atctgattgagccgtgccaatatc 122
||||||||||||||||||||||||
Sbjct: 65 atctgattgagccgtgccaatatc 88
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 99 atctgattgagccgtgccaatatc 122
||||||||||||||||||||||||
Sbjct: 68 atctgattgagccgtgccaatatc 91
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 99 atctgattgagccgtgccaatatc 122
||||||||||||||||||||||||
Sbjct: 68 atctgattgagccgtgccaatatc 91
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 99 atctgattgagccgtgccaatatc 122
||||||||||||||||||||||||
Sbjct: 52 atctgattgagccgtgccaatatc 75
>40363_rco-MIR171e:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 99 atctgattgagccgtgccaatatc 122
||||||||||||||||||||||||
Sbjct: 56 atctgattgagccgtgccaatatc 79
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 88 tctgattgagccgtgccaatatc 110
>42765_zma-MIR171e:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 85 tctgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 80 tctgattgagccgtgccaatatc 102
>42640_tae-MIR171a:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 66 tctgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 112 tctgattgagccgtgccaatatc 134
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 91 tctgattgagccgtgccaatatc 113
>41985_osa-MIR171e:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 103 tctgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 110 tctgattgagccgtgccaatatc 132
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 96 ttgatctgattgagccgtgccaatatc 122
||||| |||||||||||||||||||||
Sbjct: 94 ttgatttgattgagccgtgccaatatc 120
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 99 tctgattgagccgtgccaatatc 121
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 93 tctgattgagccgtgccaatatc 115
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tctgattgagccgtgccaatatc 122
|||||||||||||||||||||||
Sbjct: 73 tctgattgagccgtgccaatatc 95
>42762_zma-MIR171b:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>41983_osa-MIR171c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatc 89
>41982_osa-MIR171b:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatc 90
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatc 84
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatc 90
>41538_sly-MIR171a:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatc 92
>41216_crt-MIR171:mirbase
Length = 201
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 161 tgattgagccgtgccaatatc 181
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 21 tgattgagccgtgccaatatc 1
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 84 tgattgagccgtgccaatatc 104
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 80 tgattgagccgtgccaatatc 100
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatc 97
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 121 tgattgagccgtgccaatatc 141
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatc 97
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 80 tgattgagccgtgccaatatc 100
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 80 tgattgagccgtgccaatatc 100
>40457_gma-MIR171c:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatc 92
>40364_rco-MIR171f:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 86 tgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 99 tgattgagccgtgccaatatc 119
>40360_rco-MIR171b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 63 tgattgagccgtgccaatatc 83
>40359_rco-MIR171a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatc 84
>40318_bra-MIR171a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>40305_bol-MIR171a:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>40289_bna-MIR171e:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87
>40288_bna-MIR171d:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>40062_ath-MIR171c:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>39851_aly-MIR171c:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgattgagccgtgccaatatc 122
|||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatc 94
