miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 168 bits (85), Expect = 5e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 60
Query: 68 gaacaatgaatgcgactgtggccccacat 96
||||||||||||| |||||||||||||||
Sbjct: 61 gaacaatgaatgcaactgtggccccacat 89
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 10 aaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactga 69
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 1 aaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggacaagctcactga 60
Query: 70 acaatgaatgcgactgtggccccac 94
||||||||||| |||||||||||||
Sbjct: 61 acaatgaatgcaactgtggccccac 85
>27579_lla-mir-181b:mirbase
Length = 110
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 67
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 68 gaacaatgaatgcgactgtggcccc 92
||||||||||||| |||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 67
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 68 gaacaatgaatgcgactgtggcccc 92
||||||||||||| |||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 67
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 68 gaacaatgaatgcgactgtggcccc 92
||||||||||||| |||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 67
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 68 gaacaatgaatgcgactgtggcccc 92
||||||||||||| |||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 67
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 68 gaacaatgaatgcgactgtggcccc 92
||||||||||||| |||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 67
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 68 gaacaatgaatgcgactgtggcccc 92
||||||||||||| |||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 67
|||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcact 81
Query: 68 gaacaatgaatgcgactgtggcccc 92
||||||||||||| |||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>28223_mne-mir-181b:mirbase
Length = 110
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 67
|||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcact 81
Query: 68 gaacaatgaatgcgactgtggcccc 92
||||||||||||| |||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 67
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 68 gaacaatgaatgcgactgtggcccc 92
||||||||| ||| |||||||||||
Sbjct: 82 gaacaatgagtgcaactgtggcccc 106
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 131 bits (66), Expect = 1e-31
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 12 ggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 71
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
Query: 72 aatgaatgcgactg 85
||||||||| ||||
Sbjct: 61 aatgaatgcaactg 74
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 127 bits (64), Expect = 2e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 9 aaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactg 68
||||||||||||||||||||||||||||||||||||| |||| ||| || ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 82
Query: 69 aacaatgaatgcgactgtggcccc 92
|||||||||||| |||||||||||
Sbjct: 83 aacaatgaatgcaactgtggcccc 106
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 12 ggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 71
|||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 1 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaac 60
Query: 72 aatgaatgcgactgtggccc 91
||||||||| ||||||||||
Sbjct: 61 aatgaatgcaactgtggccc 80
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 119 bits (60), Expect = 4e-28
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 11 aggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaa 70
||||||||||||||||||||||||||||||||||| |||| ||| || ||||||||||||
Sbjct: 1 aggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaa 60
Query: 71 caatgaatgcgactgtggcc 90
|||||||||| |||||||||
Sbjct: 61 caatgaatgcaactgtggcc 80
>31511_oan-mir-181b:mirbase
Length = 110
Score = 113 bits (57), Expect = 2e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 9 aaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactg 68
||||||| |||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 14 aaaggtcccaatgaacattcattgctgtcggtgggtttaactctgaggacaagctcactg 73
Query: 69 aacaatgaatgcgactgtggc 89
||||||||||| ||||||||
Sbjct: 74 aacaatgaatggaactgtggc 94
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 9 aaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactg 68
|||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||
Sbjct: 1 aaaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggaagagctcactg 60
Query: 69 aacaatgaatgcgactgtg 87
||| |||||||| ||||||
Sbjct: 61 aacgatgaatgcaactgtg 79
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 9 aaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactg 68
|||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||
Sbjct: 1 aaaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggaagagctcactg 60
Query: 69 aacaatgaatgcgactgtg 87
||| |||||||| ||||||
Sbjct: 61 aacgatgaatgcaactgtg 79
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 101 bits (51), Expect = 9e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 22 aacattcattgctgtcggtgggtttaactatgtggacaagctcactgaacaatgaatgc 80
|||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaacaatgaatgc 59
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 10 aaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcactga 69
|||||||||||||||||||||||||||||||||||| | || | |||||||| ||||
Sbjct: 1 aaggtcacaatcaacattcattgctgtcggtgggttgagttaagaacacaagctcgctga 60
Query: 70 acaatgaatgcgactgtggcccc 92
|| |||||||| |||||| ||||
Sbjct: 61 acgatgaatgcaactgtgtcccc 83
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 69.9 bits (35), Expect = 3e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 9 aaaggtcacaatcaacattcattgctgtcggtgggttta 47
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 24 aaaggtcataatcaacattcattgctgtcggtgggttta 62
>27772_mml-mir-181d:mirbase
Length = 137
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 10 aaggtcacaatcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||| ||||||||||||
Sbjct: 24 aaggtcacaatcaacattcattgttgtcggtgggtt 59
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 10 aaggtcacaatcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||| ||||||||||||
Sbjct: 23 aaggtcacaatcaacattcattgttgtcggtgggtt 58
>33249_bta-mir-181d:mirbase
Length = 113
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 10 aaggtcacaatcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||| ||||||||||||
Sbjct: 23 aaggtcacaatcaacattcattgttgtcggtgggtt 58
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 11 aggtcacaatcaacattcattgctgtcggtgggtt 45
|||||||||||||||||||||| ||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgttgtcggtgggtt 59
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 11 aggtcacaatcaacattcattgctgtcggtgggtt 45
|||||||||||||||||||||| ||||||||||||
Sbjct: 24 aggtcacaatcaacattcattgttgtcggtgggtt 58
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggttt 46
||||||||||||||||||||||||||||||
Sbjct: 11 caatcaacattcattgctgtcggtgggttt 40
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggttt 46
||||||||||||||||||||||||||||||
Sbjct: 6 caatcaacattcattgctgtcggtgggttt 35
>31512_oan-mir-181c:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 13 gtcacaatcaacattcattgctgtcggtgggtt 45
||||||||||||||||||| |||||||||||||
Sbjct: 10 gtcacaatcaacattcattactgtcggtgggtt 42
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 14 tcacaatcaacattcattgctgtcggtgggtt 45
||||||||||||||||||| ||||||||||||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggtt 32
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 14 tcacaatcaacattcattgctgtcggtgggtt 45
||||||||||||||||||| ||||||||||||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggtt 32
>27062_eca-mir-181b:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggttt 46
|||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggttt 40
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggttt 46
|||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggttt 40
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggttt 46
|||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggttt 40
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggttt 46
|||||||||||||||||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggttt 39
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggttt 46
|||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggttt 40
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggttt 46
|||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggttt 40
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggttt 46
|||||||||||||||||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggttt 39
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggttt 46
|||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggttt 40
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggttt 46
|||||||||||||||||||||||||||
Sbjct: 11 tcaacattcattgctgtcggtgggttt 37
>32767_rno-mir-181d:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 ggtcacaatcaacattcattgctgtcggtgggtt 45
||||||||| ||||||||||| ||||||||||||
Sbjct: 1 ggtcacaattaacattcattgttgtcggtgggtt 34
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggttt 46
|||| |||||||||||||||||||||||||
Sbjct: 11 caataaacattcattgctgtcggtgggttt 40
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggttt 46
|||| |||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggttt 35
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggttt 46
|||| |||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggttt 35
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggtt 45
|||| ||||||||||||||||||||||||
Sbjct: 9 caataaacattcattgctgtcggtgggtt 37
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 aacattcattgctgtcggtgggttt 46
|||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttt 25
>34332_dre-mir-181c:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 acattcattgctgtcggtgggttt 46
||||||||||||||||||||||||
Sbjct: 13 acattcattgctgtcggtgggttt 36
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 16 acaatcaacattcattgctgtcggtgggtt 45
||||| ||||||||||| ||||||||||||
Sbjct: 1 acaattaacattcattgttgtcggtgggtt 30
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aacattcattgctgtcggtgggtt 45
||||||||||| ||||||||||||
Sbjct: 1 aacattcattgttgtcggtgggtt 24