miRNEST 2.0, an integrative microRNA resource :: BLAST
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 155 bits (78), Expect = 7e-39
Identities = 85/86 (98%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 8 ctaatggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaatggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactg 60
Query: 68 atcaatgaatgcaaaactgcggacca 93
|||||||||||| |||||||||||||
Sbjct: 61 atcaatgaatgc-aaactgcggacca 85
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 123 bits (62), Expect = 3e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 13 ggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatcaa 72
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 1 ggctgcaatcaacattcattgctgtcggtgggttttcatttctatcaactcactgaccaa 60
Query: 73 tgaatgcaaa 82
||||||||||
Sbjct: 61 tgaatgcaaa 70
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 87.7 bits (44), Expect = 1e-18
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 11 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 70
||||||||| ||||||||||||||||||||||||||| || | | |||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgaatgtcaaccaactcactgatc 63
Query: 71 aatgaatgcaaa 82
||||||||||||
Sbjct: 64 aatgaatgcaaa 75
>27062_eca-mir-181b:mirbase
Length = 89
Score = 85.7 bits (43), Expect = 6e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 70
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
Query: 71 aatgaatgcaaaactgcggacca 93
||||||||| |||||||||||||
Sbjct: 64 aatgaatgc-aaactgcggacca 85
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 85.7 bits (43), Expect = 6e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 70
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
Query: 71 aatgaatgcaaaactgcggacca 93
||||||||| |||||||||||||
Sbjct: 64 aatgaatgc-aaactgcggacca 85
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 85.7 bits (43), Expect = 6e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 70
||||||||| ||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgactttgaatcaactcactgatc 63
Query: 71 aatgaatgcaaaactgcggacca 93
|||||||| |||||||||||||
Sbjct: 64 aatgaatg-taaactgcggacca 85
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 85.7 bits (43), Expect = 6e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 70
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 60
Query: 71 aatgaatgcaaaactgcggacca 93
||||||||| |||||||||||||
Sbjct: 61 aatgaatgc-aaactgcggacca 82
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 79.8 bits (40), Expect = 3e-16
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 11 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 70
||||||||| ||||||||||||||||||||||||||| || | | |||||||||| ||
Sbjct: 3 atggctgcactcaacattcattgctgtcggtgggtttgaatgtcaaccaactcactggtc 62
Query: 71 aatgaatgcaaa 82
||||||||||||
Sbjct: 63 aatgaatgcaaa 74
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 77.8 bits (39), Expect = 1e-15
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 70
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
Query: 71 aatgaatgcaaaactgcggacca 93
|||||||| |||||||||||||
Sbjct: 64 gatgaatgc-aaactgcggacca 85
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 70
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 3 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 62
Query: 71 aatgaatgcaaaactgcggacca 93
|||||||| |||||||||||||
Sbjct: 63 gatgaatgc-aaactgcggacca 84
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 77.8 bits (39), Expect = 1e-15
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 atggctgcaatcaacattcattgctgtcggtgggttttcattgctatcaactcactgatc 70
||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 4 atggctgcactcaacattcattgctgtcggtgggtttgagtctgaatcaactcactgatc 63
Query: 71 aatgaatgcaaaactgcggacca 93
|||||||| |||||||||||||
Sbjct: 64 gatgaatgc-aaactgcggacca 85
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 71.9 bits (36), Expect = 8e-14
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 8 ctaatggctgcaatcaacattcattgctgtcggtgggttt-tcattgctatcaactcact 66
|||||| ||||||| ||||||||||||||||||||||||| | || | | |||||||||
Sbjct: 1 ctaatgactgcaataaacattcattgctgtcggtgggtttctaatagaca-caactcact 59
Query: 67 gatcaatgaatgcaaa 82
||||||||||||||||
Sbjct: 60 gatcaatgaatgcaaa 75
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 10 aatggctgcaatcaacattcattgctgtcggtgggtt 46
|||||||||||| ||||||||||||||||||||||||
Sbjct: 1 aatggctgcaataaacattcattgctgtcggtgggtt 37
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 23 aacattcattgctgtcggtgggttttcattgctatcaactcactgatcaatgaatgcaaa 82
||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtttgagtctgaatcaactcactgatcaatgaatgcaaa 60
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggttt 47
||||||||||||||||||||||||||||||
Sbjct: 10 caatcaacattcattgctgtcggtgggttt 39
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggttt 47
||||||||||||||||||||||||||||||
Sbjct: 8 caatcaacattcattgctgtcggtgggttt 37
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggttt 47
||||||||||||||||||||||||||||||
Sbjct: 9 caatcaacattcattgctgtcggtgggttt 38
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggttt 47
||||||||||||||||||||||||||||||
Sbjct: 9 caatcaacattcattgctgtcggtgggttt 38
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 8 caatcaacattcattgctgtcggtgggtt 36
>27579_lla-mir-181b:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>28223_mne-mir-181b:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 7 caatcaacattcattgctgtcggtgggtt 35
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 31 caatcaacattcattgctgtcggtgggtt 59
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||||||||||||||||
Sbjct: 6 caatcaacattcattgctgtcggtgggtt 34
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 19 aatcaacattcattgctgtcggtgggttt 47
|||||||||||||||||||||||||||||
Sbjct: 33 aatcaacattcattgctgtcggtgggttt 61
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 17 gcaatcaacattcattgctgtcggtgggttt 47
||||| |||||||||||||||||||||||||
Sbjct: 5 gcaataaacattcattgctgtcggtgggttt 35
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 17 gcaatcaacattcattgctgtcggtgggttt 47
||||| |||||||||||||||||||||||||
Sbjct: 5 gcaataaacattcattgctgtcggtgggttt 35
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggttt 47
|||| |||||||||||||||||||||||||
Sbjct: 6 caatgaacattcattgctgtcggtgggttt 35
>31511_oan-mir-181b:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggttt 47
|||| |||||||||||||||||||||||||
Sbjct: 22 caatgaacattcattgctgtcggtgggttt 51
>27772_mml-mir-181d:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||| ||||||||||||
Sbjct: 31 caatcaacattcattgttgtcggtgggtt 59
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||| ||||||||||||
Sbjct: 31 caatcaacattcattgttgtcggtgggtt 59
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||| ||||||||||||
Sbjct: 30 caatcaacattcattgttgtcggtgggtt 58
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||| ||||||||||||
Sbjct: 30 caatcaacattcattgttgtcggtgggtt 58
>31512_oan-mir-181c:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
||||||||||||||| |||||||||||||
Sbjct: 14 caatcaacattcattactgtcggtgggtt 42
>33249_bta-mir-181d:mirbase
Length = 113
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||| ||||||||||||
Sbjct: 30 caatcaacattcattgttgtcggtgggtt 58
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||| ||||||||||||
Sbjct: 4 caatcaacattcattgttgtcggtgggtt 32
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||||||||||||||| ||||||||||||
Sbjct: 4 caatcaacattcattgttgtcggtgggtt 32
>34332_dre-mir-181c:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 24 acattcattgctgtcggtgggtttt 48
|||||||||||||||||||||||||
Sbjct: 13 acattcattgctgtcggtgggtttt 37
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 aacattcattgctgtcggtgggtt 46
||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtt 24
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||| ||||||||||| ||||||||||||
Sbjct: 2 caattaacattcattgttgtcggtgggtt 30
>32767_rno-mir-181d:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 18 caatcaacattcattgctgtcggtgggtt 46
|||| ||||||||||| ||||||||||||
Sbjct: 6 caattaacattcattgttgtcggtgggtt 34
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 23 aacattcattgctgtcggtgggtt 46
||||||||||| ||||||||||||
Sbjct: 1 aacattcattgttgtcggtgggtt 24
