miRNEST 2.0, an integrative microRNA resource :: BLAST
>42636_tae-MIR160:mirbase
Length = 148
Score = 117 bits (59), Expect = 2e-27
Identities = 103/118 (87%), Gaps = 11/118 (9%)
Strand = Plus / Plus
Query: 5 tgggatatgcctggctccctgtatgccactcgcgtagctgccaactcggttcacctccca 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 15 tgggatatgcctggctccctgtatgccactcgcgtagctgccaactc---------ccca 65
Query: 65 ccaccgtagcgttggctctaccgcggatggcgtgcgaggagccaagcatgaccatctc 122
| | | ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66 --aaccttgcgttggctctaccgcggatggcgtgcgaggagccaagcatgaccgtctc 121
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 89.7 bits (45), Expect = 4e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 5 tgggatatgcctggctccctgtatgccactcgcgtagctgccaac 49
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 tgggatatgcctggctccctgtatgccactcgcgtagctgccaac 69
Score = 89.7 bits (45), Expect = 4e-19
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 74 cgttggctctaccgcggatggcgtgcgaggagccaagcatgaccatctc 122
|||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 104 cgttggctctaccgcggatggcgtgcgaggagccaagcatgaccgtctc 152
>41926_osa-MIR160d:mirbase
Length = 142
Score = 85.7 bits (43), Expect = 7e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 6 gggatatgcctggctccctgtatgccactcgcgtagctgccaa 48
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gggatatgcctggctccctgtatgccactcgcgtagctgccaa 44
Score = 75.8 bits (38), Expect = 7e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 76 ttggctctaccgcggatggcgtgcgaggagccaagcatgacc 117
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 101 ttggctctactgcggatggcgtgcgaggagccaagcatgacc 142
>42704_zma-MIR160d:mirbase
Length = 142
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 8 gatatgcctggctccctgtatgccactcgcgtagctgccaactc 51
|||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 17 gatatgcctggctccctgtatgccactcgcatggctgccaactc 60
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 74 cgttggctctaccgcggatggcgtgcgaggagccaagcatgacc 117
||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 85 cgttggctccactgcggatggcgtgcgtggagccaagcatgacc 128
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 74 cgttggctctaccgcggatggcgtgcgaggagccaagca 112
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 62 cgttggctctactgcggatggcgtgcgaggagccaagca 100
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactcgcgtagctgccaac 49
|||||||||||||||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcgcttagctgccaac 38
>41927_osa-MIR160e:mirbase
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 6 gggatatgcctggctccctgtatgccactcgcgtagctgccaac 49
|||||||||||||||||||||||||| ||||| | |||||||||
Sbjct: 5 gggatatgcctggctccctgtatgccgctcgcatggctgccaac 48
>42705_zma-MIR160e:mirbase
Length = 94
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgccactcgc 37
|||||||||||||||||||||||||||||
Sbjct: 6 atatgcctggctccctgtatgccactcgc 34
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 87 gcggatggcgtgcgaggagccaagcatg 114
|||| |||||||||||| ||||||||||
Sbjct: 61 gcggctggcgtgcgaggtgccaagcatg 88
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 4 ttgggatatgcctggctccctgtatgccactc 35
||||||| ||||||||||||||||||||||||
Sbjct: 23 ttgggatgtgcctggctccctgtatgccactc 54
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactcgc 37
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcgc 26
>42706_zma-MIR160f:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgccactcgc 37
||||||||||||||||||||||| |||||
Sbjct: 18 atatgcctggctccctgtatgccgctcgc 46
>42703_zma-MIR160c:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 ggatatgcctggctccctgtatgccactc 35
|||| ||||||||||||||||||||||||
Sbjct: 2 ggatgtgcctggctccctgtatgccactc 30
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 86 cgcggatggcgtgcgaggagccaagcatg 114
||||||||||||||||||||||| |||||
Sbjct: 64 cgcggatggcgtgcgaggagccatgcatg 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgcca 32
||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgcca 31
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 tgggatatgcctggctccctgtatgccac 33
|||| ||||||||||||||||||||||||
Sbjct: 4 tgggttatgcctggctccctgtatgccac 32
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 92 tggcgtgcgaggagccaagcat 113
||||||||||||||||||||||
Sbjct: 75 tggcgtgcgaggagccaagcat 96
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 tgggatatgcctggctccctgtatgccac 33
|||| ||||||||||||||||||||||||
Sbjct: 4 tgggttatgcctggctccctgtatgccac 32
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 92 tggcgtgcgaggagccaagcat 113
||||||||||||||||||||||
Sbjct: 74 tggcgtgcgaggagccaagcat 95
>42677_ttu-MIR160:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccactc 32
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>41925_osa-MIR160c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgccactc 30
>41924_osa-MIR160b:mirbase
Length = 139
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccactc 35
||||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccactc 53
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcca 31
>41529_sly-MIR160a:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 atatgcctggctccctgtatgcca 32
||||||||||||||||||||||||
Sbjct: 17 atatgcctggctccctgtatgcca 40
>40340_rco-MIR160b:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgccac 27
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 92 tggcgtgcgaggagccaagcat 113
||||||||||||||||||||||
Sbjct: 69 tggcgtgcgaggagccaagcat 90
>40021_ath-MIR160c:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgccac 26
>39809_aly-MIR160c:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgccac 33
||||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgccac 45
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 92 tggcgtgcgaggagccaagcatgaccat 119
|||||| | |||||||||||||||||||
Sbjct: 83 tggcgtacaaggagccaagcatgaccat 110
>42707_zma-MIR160g:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgccac 23
>41869_far-MIR160:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 atgcctggctccctgtatgccac 33
|||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgccac 74
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 87 gcggatggcgtgcgaggagccaagcat 113
|||| ||||||||||||||||||||||
Sbjct: 69 gcgggtggcgtgcgaggagccaagcat 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcca 41
>40312_bra-MIR160a:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgcca 46
>40019_ath-MIR160a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 2 tatgcctggctccctgtatgcca 24
>39807_aly-MIR160a:mirbase
Length = 158
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 tatgcctggctccctgtatgcca 32
|||||||||||||||||||||||
Sbjct: 40 tatgcctggctccctgtatgcca 62
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccact 34
|||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccact 52
>42702_zma-MIR160b:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>42701_zma-MIR160a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgccac 31
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>41923_osa-MIR160a:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgccac 25
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgccac 52
>40020_ath-MIR160b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>39808_aly-MIR160b:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>39732_smo-MIR160b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>39374_pab-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgccac 33
||||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgccac 35
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>41219_csi-MIR160:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgcca 53
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 89 ggatggcgtgcgaggagccaagcat 113
|||||||||||||||||||| ||||
Sbjct: 57 ggatggcgtgcgaggagccatgcat 81
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>40658_mtr-MIR160:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 91 atggcgtgcgaggagccaagcatg 114
|||||||||||||||||| |||||
Sbjct: 79 atggcgtgcgaggagccatgcatg 102
>40436_gma-MIR160:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>40339_rco-MIR160a:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgcca 26
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39463_ppt-MIR160i:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 gcctggctccctgtatgccac 33
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 tgcctggctccctgtatgcca 32
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
