miRNEST 2.0, an integrative microRNA resource :: BLAST
>25910_gga-mir-27b:mirbase
Length = 97
Score = 153 bits (77), Expect = 3e-38
Identities = 94/97 (96%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 6 acctctctggtggggtgcagagcttagctgattggtgaacagtga-tgtttccctc-ttg 63
|||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 1 acctctctggtgaggtgcagagcttagctgattggtgaacagtgattgtttccctctttg 60
Query: 64 ttcacagtggctaagttctgcacctgaagagaaggtg 100
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>26416_tgu-mir-27:mirbase
Length = 91
Score = 121 bits (61), Expect = 1e-28
Identities = 84/89 (94%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 8 ctctctggtggggtgcagagcttagctgattggtgaacagtga-tgtttccctc-ttgtt 65
|||||||| | |||||||||||||||||||||||||||||||| ||||| |||| |||||
Sbjct: 3 ctctctggcgaggtgcagagcttagctgattggtgaacagtgattgttttcctctttgtt 62
Query: 66 cacagtggctaagttctgcacctgaagag 94
|||||||||||||||||||||||||||||
Sbjct: 63 cacagtggctaagttctgcacctgaagag 91
>27674_mml-mir-27b:mirbase
Length = 97
Score = 121 bits (61), Expect = 1e-28
Identities = 79/84 (94%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgat--gtttccctcttgttcacagtggcta 76
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 14 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 73
Query: 77 agttctgcacctgaagagaaggtg 100
||||||||||||||||||||||||
Sbjct: 74 agttctgcacctgaagagaaggtg 97
>28384_hsa-mir-27b:mirbase
Length = 97
Score = 121 bits (61), Expect = 1e-28
Identities = 79/84 (94%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgat--gtttccctcttgttcacagtggcta 76
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 14 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 73
Query: 77 agttctgcacctgaagagaaggtg 100
||||||||||||||||||||||||
Sbjct: 74 agttctgcacctgaagagaaggtg 97
>30170_ptr-mir-27b:mirbase
Length = 96
Score = 121 bits (61), Expect = 1e-28
Identities = 79/84 (94%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgat--gtttccctcttgttcacagtggcta 76
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 13 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 72
Query: 77 agttctgcacctgaagagaaggtg 100
||||||||||||||||||||||||
Sbjct: 73 agttctgcacctgaagagaaggtg 96
>30775_ppy-mir-27b:mirbase
Length = 97
Score = 121 bits (61), Expect = 1e-28
Identities = 79/84 (94%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgat--gtttccctcttgttcacagtggcta 76
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 14 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 73
Query: 77 agttctgcacctgaagagaaggtg 100
||||||||||||||||||||||||
Sbjct: 74 agttctgcacctgaagagaaggtg 97
>32681_rno-mir-27b:mirbase
Length = 97
Score = 121 bits (61), Expect = 1e-28
Identities = 79/84 (94%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgat--gtttccctcttgttcacagtggcta 76
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 14 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 73
Query: 77 agttctgcacctgaagagaaggtg 100
||||||||||||||||||||||||
Sbjct: 74 agttctgcacctgaagagaaggtg 97
>25724_xtr-mir-27b:mirbase
Length = 96
Score = 117 bits (59), Expect = 2e-27
Identities = 76/79 (96%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgat-gtttccctctt-gttcacagtggcta 76
||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||
Sbjct: 14 ggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggcta 73
Query: 77 agttctgcacctgaagaga 95
|||||||||||||||||||
Sbjct: 74 agttctgcacctgaagaga 92
>33156_bta-mir-27b:mirbase
Length = 97
Score = 115 bits (58), Expect = 6e-27
Identities = 88/97 (90%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 6 acctctctggtggggtgcagagcttagctgattggtgaacagtgat--gtttccctcttg 63
||||||||| | |||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 1 acctctctgacgaggtgcagagcttagctgattggtgaacagtgactggtttccgctttg 60
Query: 64 ttcacagtggctaagttctgcacctgaagagaaggtg 100
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagagaaggtg 97
>27352_mdo-mir-27b:mirbase
Length = 97
Score = 99.6 bits (50), Expect = 4e-22
Identities = 76/82 (92%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtga-tgtttccctctt-gttcacagtggcta 76
||||||||||||||| |||||||||||||| | || || |||||| ||||||||||||||
Sbjct: 14 ggtgcagagcttagccgattggtgaacagtcactgatttcctctttgttcacagtggcta 73
Query: 77 agttctgcacctgaagagaagg 98
||||||||||||||||||||||
Sbjct: 74 agttctgcacctgaagagaagg 95
>31798_mmu-mir-27b:mirbase
Length = 73
Score = 97.6 bits (49), Expect = 2e-21
Identities = 67/72 (93%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgat--gtttccctcttgttcacagtggcta 76
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 2 ggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggcta 61
Query: 77 agttctgcacct 88
||||||||||||
Sbjct: 62 agttctgcacct 73
>33932_ssc-mir-27b:mirbase
Length = 80
Score = 97.6 bits (49), Expect = 2e-21
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtga--tgtttccctcttgttcacagtggcta 76
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 5 ggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggcta 64
Query: 77 agttctgcacctgaag 92
||||||||||||||||
Sbjct: 65 agttctgcacctgaag 80
>26967_eca-mir-27b:mirbase
Length = 73
Score = 89.7 bits (45), Expect = 4e-19
Identities = 66/72 (91%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtga--tgtttccctcttgttcacagtggcta 76
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 2 ggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggcta 61
Query: 77 agttctgcacct 88
||||||||||||
Sbjct: 62 agttctgcacct 73
>34566_fru-mir-27b:mirbase
Length = 74
Score = 89.7 bits (45), Expect = 4e-19
Identities = 65/69 (94%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 23 cagagcttagctgattggtgaacagtga-tgtttccctc-ttgttcacagtggctaagtt 80
|||||||||||||||||||||||||||| || || |||| ||||||||||||||||||||
Sbjct: 6 cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65
Query: 81 ctgcacctg 89
|||||||||
Sbjct: 66 ctgcacctg 74
>34713_tni-mir-27b:mirbase
Length = 74
Score = 89.7 bits (45), Expect = 4e-19
Identities = 65/69 (94%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 23 cagagcttagctgattggtgaacagtga-tgtttccctc-ttgttcacagtggctaagtt 80
|||||||||||||||||||||||||||| || || |||| ||||||||||||||||||||
Sbjct: 6 cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65
Query: 81 ctgcacctg 89
|||||||||
Sbjct: 66 ctgcacctg 74
>34238_dre-mir-27b:mirbase
Length = 91
Score = 81.8 bits (41), Expect = 9e-17
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 19 ggtgcagagcttagctgattggtgaacagtgatgtttccctcttgttcacagtggctaag 78
||||||||||||||||||||||||||||||||| | || ||||||||||||||||||
Sbjct: 13 ggtgcagagcttagctgattggtgaacagtgattgaactct-ttgttcacagtggctaag 71
Query: 79 ttctgcacctgaagaga 95
||||||| |||| ||||
Sbjct: 72 ttctgcatctgaggaga 88
>26646_cfa-mir-27b:mirbase
Length = 63
Score = 71.9 bits (36), Expect = 9e-14
Identities = 57/63 (90%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 24 agagcttagctgattggtgaacagtga--tgtttccctcttgttcacagtggctaagttc 81
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 1 agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60
Query: 82 tgc 84
|||
Sbjct: 61 tgc 63
>31445_oan-mir-27b:mirbase
Length = 117
Score = 69.9 bits (35), Expect = 3e-13
Identities = 70/79 (88%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 22 gcagagcttagctgattggtgaacagtga-tgtttccctc-ttgttcacagtggctaagt 79
||||||||||||||||||||||||||||| || | ||| |||||||||||||||||||
Sbjct: 28 gcagagcttagctgattggtgaacagtgattgctggactctttgttcacagtggctaagt 87
Query: 80 tctgcacctgaagagaagg 98
||||| || | ||||||||
Sbjct: 88 tctgcgcccgcagagaagg 106
>25450_pma-mir-27b:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttctgca 85
||||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgca 70
>34240_dre-mir-27d:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 18 gggtgcagagcttagctgattggtgaac 45
||||||||||||| ||||||||||||||
Sbjct: 9 gggtgcagagcttggctgattggtgaac 36
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 61 ttgttcacagtggctaagttctgcacctgaagagaa 96
|||||||||||||||||||||| |||| ||| ||||
Sbjct: 54 ttgttcacagtggctaagttcttcacccgaaaagaa 89
>25449_pma-mir-27a:mirbase
Length = 75
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 tcttgttcacagtggctaagttc 81
|||||||||||||||||||||||
Sbjct: 45 tcttgttcacagtggctaagttc 67
>34568_fru-mir-27e:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgttcacagtggctaagttc 81
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>34715_tni-mir-27e:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttgttcacagtggctaagttc 81
|||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77
>25723_xtr-mir-27a:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>25725_xtr-mir-27c-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>25726_xtr-mir-27c-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>26645_cfa-mir-27a:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 39 tgttcacagtggctaagttc 58
>26966_eca-mir-27a:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27351_mdo-mir-27a:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>27491_age-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27599_sla-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>27673_mml-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28187_mne-mir-27a:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28273_ggo-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>28383_hsa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30060_ppa-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30169_ptr-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>30774_ppy-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31404_lca-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68
>31444_oan-mir-27a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 51 tgttcacagtggctaagttc 70
>31797_mmu-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>32680_rno-mir-27a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73
>33154_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33155_bta-mir-27a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>33931_ssc-mir-27a:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71
>34237_dre-mir-27a:mirbase
Length = 131
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttc 96
>34241_dre-mir-27e:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 tgttcacagtggctaagttc 81
||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82
