miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26010_gga-mir-221:mirbase
Length = 99
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 ttggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ttggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacatt 72
Query: 61 gtctgctgggtttccagctgc 81
|||||||||||||||||||||
Sbjct: 73 gtctgctgggtttccagctgc 93
>26517_tgu-mir-221:mirbase
Length = 73
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 12 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
Query: 72 ttccagctgc 81
||||||||||
Sbjct: 61 ttccagctgc 70
>31951_mmu-mir-221:mirbase
Length = 95
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 2 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattg 61
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaggcaacagctacattg 69
Query: 62 tctgctgggtttc 74
|||||||||||||
Sbjct: 70 tctgctgggtttc 82
>32817_rno-mir-221:mirbase
Length = 109
Score = 137 bits (69), Expect = 1e-33
Identities = 72/73 (98%)
Strand = Plus / Plus
Query: 2 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattg 61
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 15 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaggcaacagctacattg 74
Query: 62 tctgctgggtttc 74
|||||||||||||
Sbjct: 75 tctgctgggtttc 87
>33301_bta-mir-221:mirbase
Length = 110
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 4 gggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtc 63
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 17 gggcatgaacctggcatacaatgtagatttctgtgtttgttgagcaacagctacattgtc 76
Query: 64 tgctgggtttc 74
|||||||||||
Sbjct: 77 tgctgggtttc 87
>27819_mml-mir-221:mirbase
Length = 110
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 2 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattg 61
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 15 tggggcatgaacctggcatacaatgtagatttctgtgttcgttaggcaacagctacattg 74
Query: 62 tctgctgggtttc 74
|||||||||||||
Sbjct: 75 tctgctgggtttc 87
>28336_ggo-mir-221:mirbase
Length = 110
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 2 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattg 61
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 15 tggggcatgaacctggcatacaatgtagatttctgtgttcgttaggcaacagctacattg 74
Query: 62 tctgctgggtttc 74
|||||||||||||
Sbjct: 75 tctgctgggtttc 87
>28542_hsa-mir-221:mirbase
Length = 110
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 2 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattg 61
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 15 tggggcatgaacctggcatacaatgtagatttctgtgttcgttaggcaacagctacattg 74
Query: 62 tctgctgggtttc 74
|||||||||||||
Sbjct: 75 tctgctgggtttc 87
>30123_ppa-mir-221:mirbase
Length = 110
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 2 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattg 61
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 15 tggggcatgaacctggcatacaatgtagatttctgtgttcgttaggcaacagctacattg 74
Query: 62 tctgctgggtttc 74
|||||||||||||
Sbjct: 75 tctgctgggtttc 87
>30300_ptr-mir-221:mirbase
Length = 109
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 2 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattg 61
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 15 tggggcatgaacctggcatacaatgtagatttctgtgttcgttaggcaacagctacattg 74
Query: 62 tctgctgggtttc 74
|||||||||||||
Sbjct: 75 tctgctgggtttc 87
>30916_ppy-mir-221:mirbase
Length = 110
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 2 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattg 61
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 15 tggggcatgaacctggcatacaatgtagatttctgtgttcgttaggcaacagctacattg 74
Query: 62 tctgctgggtttc 74
|||||||||||||
Sbjct: 75 tctgctgggtttc 87
>31541_oan-mir-221:mirbase
Length = 93
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 5 ggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtct 64
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 12 ggcatgaacctggcatacaatgtagaattctgtatttgttaagcaacagctacattgtct 71
Query: 65 gctgggtttccagct 79
|||||||||| ||||
Sbjct: 72 gctgggtttcaagct 86
>27106_eca-mir-221:mirbase
Length = 110
Score = 121 bits (61), Expect = 8e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 2 tggggcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattg 61
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 15 tggggcatgaacctggcatacaatgtagatttctgtgtttcttgggcaacagctacattg 74
Query: 62 tctgctgggtttc 74
|||||||||||||
Sbjct: 75 tctgctgggtttc 87
>34046_ssc-mir-221:mirbase
Length = 70
Score = 115 bits (58), Expect = 5e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 9 tgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctg 68
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tgaacctggcatacaatgtagatttctgtgtttgttgggcaacagctacattgtctgctg 60
Query: 69 ggtttc 74
||||||
Sbjct: 61 ggtttc 66
>27434_mdo-mir-221:mirbase
Length = 74
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 6 gcatgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctg 65
||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||
Sbjct: 1 gcatgaacctggcatacaatgtagaattctgtgtttattaagtaacagctacattgtctg 60
Query: 66 ctgggtttc 74
|||||||||
Sbjct: 61 ctgggtttc 69
>26782_cfa-mir-221:mirbase
Length = 62
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 12 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 71
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 acctggcatacaatgtagatttctgtgtttgttgggcaacagctacattgtctgctgggt 60
Query: 72 tt 73
||
Sbjct: 61 tt 62
>25840_xtr-mir-221:mirbase
Length = 93
Score = 85.7 bits (43), Expect = 4e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 12 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 71
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 19 acctggcatacaatgtagaaaactgtgtttgcaaagcaacagctacattgtctgctgggt 78
Query: 72 ttc 74
|||
Sbjct: 79 ttc 81
>34381_dre-mir-221:mirbase
Length = 93
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 9 tgaacctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctg 68
||||||||||||||||||||||||||||||| | | |||||||||||||||||||
Sbjct: 5 tgaacctggcatacaatgtagatttctgtgtggtactatctacagctacattgtctgctg 64
Query: 69 ggtttc 74
||||||
Sbjct: 65 ggtttc 70
>34645_fru-mir-221:mirbase
Length = 77
Score = 67.9 bits (34), Expect = 1e-12
Identities = 62/69 (89%), Gaps = 3/69 (4%)
Strand = Plus / Plus
Query: 9 tgaacctggcatacaatgtagatttctgtgt--ttgttaagcaacagctacattgtctgc 66
||||||||||||||||||||||||||||||| ||| | | |||||||||||||||||
Sbjct: 3 tgaacctggcatacaatgtagatttctgtgtgcttg-gattctacagctacattgtctgc 61
Query: 67 tgggtttcc 75
|||||||||
Sbjct: 62 tgggtttcc 70
>34793_tni-mir-221:mirbase
Length = 69
Score = 65.9 bits (33), Expect = 4e-12
Identities = 61/68 (89%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 9 tgaacctggcatacaatgtagatttctgtgt--ttgttaagcaacagctacattgtctgc 66
||||||||||||||||||||||||||||||| ||| | | |||||||||||||||||
Sbjct: 3 tgaacctggcatacaatgtagatttctgtgtgcttg-gattctacagctacattgtctgc 61
Query: 67 tgggtttc 74
||||||||
Sbjct: 62 tgggtttc 69
>25534_pma-mir-221:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 47 gcaacagctacattgtctgctgggtt 72
||||||||||||||||||||||||||
Sbjct: 46 gcaacagctacattgtctgctgggtt 71
