miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38379_cel-mir-354:mirbase
          Length = 110

 Score =  198 bits (100), Expect = 5e-52
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaagcaccttggtgcggctgcagacgggtatccggctcgacgttcatacatcacgactt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  ctaagcaccttggtgcggctgcagacgggtatccggctcgacgttcatacatcacgactt 69

                                                   
Query: 61  ctttccttttaccttgtttgttgctgctcctattggtttt 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  ctttccttttaccttgtttgttgctgctcctattggtttt 109




>38233_cbr-mir-354:mirbase
          Length = 109

 Score =  129 bits (65), Expect = 4e-31
 Identities = 87/93 (93%), Gaps = 1/93 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   ccttggtgcggctgcagacgggtatccggctcgacgttcatacatcacgacttctttcct 67
           ||||||||||||| |||||||||||||||||||| ||||||||| | ||||| |||||||
Sbjct: 18  ccttggtgcggctacagacgggtatccggctcgatgttcatacaccgcgact-ctttcct 76

                                            
Query: 68  tttaccttgtttgttgctgctcctattggtttt 100
           |||||||||||||||||||||||| ||||||||
Sbjct: 77  tttaccttgtttgttgctgctccttttggtttt 109