miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39480_ppt-MIR319a:mirbase
          Length = 169

 Score =  291 bits (147), Expect = 1e-79
 Identities = 167/171 (97%), Gaps = 2/171 (1%)
 Strand = Plus / Plus

                                                                       
Query: 10  gtggagctccgttttcggtccaatagtggctgcgacggaaggtggtcccgctgccgaatc 69
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtggagctccgttt-cggtccaatagtggctgcgacggaaggtggtcccgctgccgaatc 59

                                                                       
Query: 70  acacgtccgggttctttatcgggggcagggccccgatacggtatccgaacgtttgtcccg 129
           |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 60  acacgtccgggttgcttatcgggg-cagggccccgatacggtatccgaacgtttgtcccg 118

                                                              
Query: 130 ggaactggtcgaccttccgcccggcgtctcttggactgaagggagctccac 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ggaactggtcgaccttccgcccggcgtctcttggactgaagggagctccac 169




>39483_ppt-MIR319d:mirbase
          Length = 170

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 156 tctcttggactgaagggagctcc 178
           |||||||||||||||||||||||
Sbjct: 142 tctcttggactgaagggagctcc 164




>39482_ppt-MIR319c:mirbase
          Length = 189

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 156 tctcttggactgaagggagctcc 178
           |||||||||||||||||||||||
Sbjct: 151 tctcttggactgaagggagctcc 173




>39481_ppt-MIR319b:mirbase
          Length = 160

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 156 tctcttggactgaagggagctcc 178
           |||||||||||||||||||||||
Sbjct: 137 tctcttggactgaagggagctcc 159




>39484_ppt-MIR319e:mirbase
          Length = 174

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 157 ctcttggactgaagggagctcc 178
           ||||||||||||||||||||||
Sbjct: 145 ctcttggactgaagggagctcc 166




>41635_vvi-MIR319b:mirbase
          Length = 194

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 tcttggactgaagggagctcc 178
           |||||||||||||||||||||
Sbjct: 161 tcttggactgaagggagctcc 181




>40368_rco-MIR319b:mirbase
          Length = 179

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 tcttggactgaagggagctcc 178
           |||||||||||||||||||||
Sbjct: 152 tcttggactgaagggagctcc 172




>42642_tae-MIR319:mirbase
          Length = 211

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctcc 202




>41770_bdi-MIR319:mirbase
          Length = 280

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctcc 244




>41638_vvi-MIR319f:mirbase
          Length = 193

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 161 cttggactgaagggagctcc 180




>41636_vvi-MIR319c:mirbase
          Length = 182

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 150 cttggactgaagggagctcc 169




>41544_sly-MIR319:mirbase
          Length = 168

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168




>41410_ptc-MIR319g:mirbase
          Length = 204

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 175 cttggactgaagggagctcc 194




>41409_ptc-MIR319f:mirbase
          Length = 202

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 173 cttggactgaagggagctcc 192




>41407_ptc-MIR319d:mirbase
          Length = 193

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 164 cttggactgaagggagctcc 183




>41406_ptc-MIR319c:mirbase
          Length = 196

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 167 cttggactgaagggagctcc 186




>41404_ptc-MIR319a:mirbase
          Length = 188

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 159 cttggactgaagggagctcc 178




>41282_ctr-MIR319:mirbase
          Length = 186

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 156 cttggactgaagggagctcc 175




>41185_aqc-MIR319:mirbase
          Length = 177

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173




>41026_pvu-MIR319c:mirbase
          Length = 734

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428




>40704_mtr-MIR319b:mirbase
          Length = 180

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 155 cttggactgaagggagctcc 174




>40703_mtr-MIR319:mirbase
          Length = 207

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctcc 187




>40465_gma-MIR319b:mirbase
          Length = 208

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 169 cttggactgaagggagctcc 188




>40464_gma-MIR319a:mirbase
          Length = 207

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctcc 187




>40369_rco-MIR319c:mirbase
          Length = 188

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181




>40367_rco-MIR319a:mirbase
          Length = 211

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204




>40070_ath-MIR319b:mirbase
          Length = 172

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 151 cttggactgaagggagctcc 170




>39859_aly-MIR319b:mirbase
          Length = 246

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 190 cttggactgaagggagctcc 209




>39740_smo-MIR319:mirbase
          Length = 215

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204




>39424_pta-MIR319:mirbase
          Length = 206

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 158 tcttggactgaagggagctccact 181
           ||||||| ||||||||||||||||
Sbjct: 28  tcttggattgaagggagctccact 5



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 ttggactgaagggagctcca 179
           ||||||||||||||||||||
Sbjct: 184 ttggactgaagggagctcca 203




>39417_pta-MIR159a:mirbase
          Length = 210

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 ttggactgaagggagctcca 179
           ||||||||||||||||||||
Sbjct: 27  ttggactgaagggagctcca 8



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 158 tcttggactgaagggagctccact 181
           ||||||| ||||||||||||||||
Sbjct: 183 tcttggattgaagggagctccact 206