miRNEST 2.0, an integrative microRNA resource :: BLAST
>41101_tcc-MIR168:mirbase
Length = 167
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggagaccgcg 132
|||||||||||||||||||||||||||||||||
Sbjct: 126 tcccgccttgcatcaactgaatcggagaccgcg 158
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 cggcagtctctaattcgcttggtgcaggtcgggaa 35
|||| ||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaa 41
>41215_crt-MIR168:mirbase
Length = 201
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 cggcagtctctaattcgcttggtgcaggtcgggaa 35
|||| ||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaa 41
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggagaccg 130
|||||||||||||||||||||||||||||||
Sbjct: 142 tcccgccttgcatcaactgaatcggagaccg 172
>41210_ccl-MIR168:mirbase
Length = 176
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 cggcagtctctaattcgcttggtgcaggtcgggaa 35
|||| ||||||||||||||||||||||||||||||
Sbjct: 6 cggcggtctctaattcgcttggtgcaggtcgggaa 40
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggagaccg 130
|||||||||||||||||||||||||||||||
Sbjct: 141 tcccgccttgcatcaactgaatcggagaccg 171
>41596_vvi-MIR168:mirbase
Length = 132
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 gtctctaattcgcttggtgcaggtcgggaa 35
||||||||||||||||||||||||||||||
Sbjct: 2 gtctctaattcgcttggtgcaggtcgggaa 31
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggagac 128
|||||||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggagac 129
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 gtctctaattcgcttggtgcaggtcgggaa 35
||||||||||||||||||||||||||||||
Sbjct: 2 gtctctaattcgcttggtgcaggtcgggaa 31
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggaga 127
||||||||||||||||||||||||||||
Sbjct: 109 tcccgccttgcatcaactgaatcggaga 136
>40448_gma-MIR168:mirbase
Length = 125
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 gtctctaattcgcttggtgcaggtcgggaa 35
||||||||||||||||||||||||||||||
Sbjct: 10 gtctctaattcgcttggtgcaggtcgggaa 39
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggagaccgcg 132
||||||||||||||||||||||||||| |||||
Sbjct: 87 tcccgccttgcatcaactgaatcggaggccgcg 119
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggag 126
|||||||||||||||||||||||||||
Sbjct: 133 tcccgccttgcatcaactgaatcggag 159
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 gtctctaattcgcttggtgcaggtcgggaa 35
|||||| |||||||||||||||||||||||
Sbjct: 2 gtctctgattcgcttggtgcaggtcgggaa 31
>40355_rco-MIR168:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 ctaattcgcttggtgcaggtcgggaa 35
||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaa 26
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcg 123
||||||||||||||||||||||||
Sbjct: 105 tcccgccttgcatcaactgaatcg 128
>40043_ath-MIR168a:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcgga 125
||||||||||||||||||||||||||
Sbjct: 102 tcccgccttgcatcaactgaatcgga 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaa 38
>39832_aly-MIR168a:mirbase
Length = 155
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcgga 125
||||||||||||||||||||||||||
Sbjct: 108 tcccgccttgcatcaactgaatcgga 133
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaa 44
>42742_zma-MIR168b:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 100 tcccgccttgcatcaactgaatcggag 126
|||||||||||||||| ||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggag 92
>40044_ath-MIR168b:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcgggaa 39
>39833_aly-MIR168b:mirbase
Length = 176
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||||
Sbjct: 41 attcgcttggtgcaggtcgggaa 63
>40271_bna-MIR168:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 tcgcttggtgcaggtcgggaa 35
|||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaa 38
