miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42373_osa-MIR2124d:mirbase
Length = 250
Score = 147 bits (74), Expect = 3e-36
Identities = 113/125 (90%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
||||||||||| |||||||||||| | |||||| ||||||||||||||||||| ||||
Sbjct: 66 aaattgcgagaggaatcttttaagcctaattgcgctatgatttgacaatgtggtgctaca 125
Query: 78 ggtaaacatttgctaatgacaaattaattaggcttaataaattcatctcgcagttttctg 137
| |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 126 g-taaatatttgctaatgacgaattaattaggcttaataaattcgactcgcagttttctg 184
Query: 138 gcgga 142
|||||
Sbjct: 185 gcgga 189
>42372_osa-MIR2124c:mirbase
Length = 248
Score = 147 bits (74), Expect = 3e-36
Identities = 113/125 (90%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
|||||||||||| |||||||||||| | |||||| ||||||||||||| |||||| ||||
Sbjct: 64 aaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaacgtggtggtaca 123
Query: 78 ggtaaacatttgctaatgacaaattaattaggcttaataaattcatctcgcagttttctg 137
| |||| |||||||||||| | |||||||||||||||||||||| ||||| |||||||||
Sbjct: 124 g-taaatatttgctaatgatagattaattaggcttaataaattcgtctcgtagttttctg 182
Query: 138 gcgga 142
|||||
Sbjct: 183 gcgga 187
>42079_osa-MIR442:mirbase
Length = 233
Score = 137 bits (69), Expect = 2e-33
Identities = 105/116 (90%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
|||||||||||||||||||||||| | ||||| |||||| ||||||||||||| ||||
Sbjct: 60 aaattgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctaca 119
Query: 78 ggtaaacatttgctaatgacaaattaattaggcttaataaattcatctcgcagttt 133
| |||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 120 g-taaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagttt 174
>42374_osa-MIR2124e:mirbase
Length = 247
Score = 129 bits (65), Expect = 6e-31
Identities = 104/116 (89%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
|||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||
Sbjct: 63 aaattgcgagacgaatcttttaagcctaattgctccatgatttgacaatgtggtgctaca 122
Query: 78 ggtaaacatttgctaatgacaaattaattaggcttaataaattcatctcgcagttt 133
||||||||||||||||||| ||||||||| | |||||||||| |||||||||||
Sbjct: 123 a-taaacatttgctaatgacagattaattagacataataaattcgtctcgcagttt 177
>42371_osa-MIR2124b:mirbase
Length = 239
Score = 115 bits (58), Expect = 9e-27
Identities = 109/125 (87%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
|||||||||||| |||||||||||| | |||||| |||||||||||||| ||||| ||||
Sbjct: 68 aaattgcgagacaaatcttttaagtctaattgcgccatgatttgacaatatggtgctaca 127
Query: 78 ggtaaacatttgctaatgacaaattaattaggcttaataaattcatctcgcagttttctg 137
|||||||||||||||| | |||||||||||||||||||||| | |||| |||| | |
Sbjct: 128 -gtaaacatttgctaataccggattaattaggcttaataaattcgtgtcgcggtttacag 186
Query: 138 gcgga 142
|||||
Sbjct: 187 gcgga 191
>42376_osa-MIR2124g:mirbase
Length = 251
Score = 107 bits (54), Expect = 2e-24
Identities = 108/125 (86%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
||||||||| |||||||||||||| | ||||| |||||| |||||||||| || ||||
Sbjct: 67 aaattgcgacacgaatcttttaagcataattgctccatgatctgacaatgtgatgctaca 126
Query: 78 ggtaaacatttgctaatgacaaattaattaggcttaataaattcatctcgcagttttctg 137
| ||||||||||||||| || |||||||||| |||||||||||| |||||| |||| | |
Sbjct: 127 g-taaacatttgctaataacgaattaattagtcttaataaattcgtctcgcggtttacag 185
Query: 138 gcgga 142
|||||
Sbjct: 186 gcgga 190
>42375_osa-MIR2124f:mirbase
Length = 252
Score = 99.6 bits (50), Expect = 5e-22
Identities = 95/109 (87%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
||||||||||| ||||||||||| | | |||||| |||||||||| ||| ||||||||||
Sbjct: 68 aaattgcgagatgaatcttttaactctaattgcgccatgatttgataatatggtgttaca 127
Query: 78 ggtaaacatttgctaatgacaaattaattaggcttaataaattcatctc 126
|||||| ||||||||||| | ||||||||| ||||| |||||| ||||
Sbjct: 128 -gtaaacttttgctaatgatagattaattagccttaacaaattcgtctc 175
>42370_osa-MIR2124a:mirbase
Length = 249
Score = 99.6 bits (50), Expect = 5e-22
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 53 catgatttgacaatgtggtgttacaggtaaacatttgctaatgacaaattaattaggctt 112
|||||||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||
Sbjct: 100 catgatttgacaatgtggtgctacag-taaatatttgctaatgacggattaattaggctt 158
Query: 113 aataaattcatctcgcagttttctggcgga 142
|||||||| ||||||||||| | ||||||
Sbjct: 159 aataaatttgtctcgcagtttacaggcgga 188
>42378_osa-MIR2124i:mirbase
Length = 250
Score = 73.8 bits (37), Expect = 3e-14
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
|||||| || |||||||||||||| | ||||| |||||| ||||||||||||| ||||
Sbjct: 66 aaattgtgaaacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctaca 125
Query: 78 ggtaaacatttgctaatgacaaattaattaggcttaataaattc 121
||||||||||| |||| | |||||| |||||||||||||||
Sbjct: 126 -gtaaacatttgttaataatggattaatcaggcttaataaattc 168
>42092_osa-MIR445a:mirbase
Length = 268
Score = 65.9 bits (33), Expect = 8e-12
Identities = 90/108 (83%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 23 gcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttacaggtaa 82
|||||||||||||||| ||| | ||| | ||||||||||||||||| || |||| ||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctaca-gtaa 128
Query: 83 acatttgctaatgacaaattaattaggcttaataaattcatctcgcag 130
|| ||| |||| | ||||||||||||||| |||||| ||||||||
Sbjct: 127 acttttcataattatggattaattaggcttaaaaaattcgtctcgcag 80
>42377_osa-MIR2124h:mirbase
Length = 275
Score = 58.0 bits (29), Expect = 2e-09
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 18 aaattgcgagacgaatcttttaagtgtnattgcgtcatgatttgacaatgtggtgttaca 77
||||| ||||| |||||||||||| | ||||| || |||||||||||||||||| ||||
Sbjct: 75 aaattacgagatgaatcttttaagcctaattgcttcttgatttgacaatgtggtgctaca 134
Score = 56.0 bits (28), Expect = 7e-09
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 62 acaatgtggtgttacaggtaaacatttgctaatgacaaattaattaggcttaataaattc 121
||||||||||| ||||| ||||||| |||||| || |||||||||||||||||||||
Sbjct: 132 acaatgtggtgctacag-taaacatatgctaacgagggattaattaggcttaataaattt 190
Query: 122 atctcgcagttt 133
|||||| ||||
Sbjct: 191 gtctcgcggttt 202
>42099_osa-MIR445h:mirbase
Length = 277
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 100 attaattaggcttaataaattcatctcgcag 130
||||||||||||||| |||||| ||||||||
Sbjct: 123 attaattaggcttaaaaaattcgtctcgcag 93
>42098_osa-MIR445g:mirbase
Length = 275
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 100 attaattaggcttaataaattcatctcgcag 130
||||||||||||||| |||||| ||||||||
Sbjct: 122 attaattaggcttaaaaaattcgtctcgcag 92
>42096_osa-MIR445e:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 100 attaattaggcttaataaattcatctcgcag 130
||||||||||||||| |||||| ||||||||
Sbjct: 117 attaattaggcttaaaaaattcgtctcgcag 87
>42094_osa-MIR445c:mirbase
Length = 260
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 100 attaattaggcttaataaattcatctcgcag 130
||||||||||||||| |||||| ||||||||
Sbjct: 115 attaattaggcttaaaaaattcgtctcgcag 85
