miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>35705_bmo-mir-2807d:mirbase
          Length = 149

 Score =  113 bits (57), Expect = 4e-26
 Identities = 118/137 (86%), Gaps = 1/137 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  ttaaccttctcgatagcctaaaagttagttcagatttgtatggagttcgagcgtttgccg 72
           ||||| || |||||||| |||||||||||||| ||||||||||| |  || |||||||||
Sbjct: 13  ttaacattttcgatagcgtaaaagttagttcatatttgtatggaatgggaccgtttgccg 72

                                                                       
Query: 73  ctaggggcgctgttccaactgcatacaaattcgagttaa-atttacgttatcgagaacgt 131
           |||| |||||||||||| ||||||||||| | | | |||  |||||| ||||||||||||
Sbjct: 73  ctagaggcgctgttccagctgcatacaaaattgggctaatttttacgctatcgagaacgt 132

                            
Query: 132 taaataactcgccctaa 148
           |||| ||||||| ||||
Sbjct: 133 taaaaaactcgcactaa 149




>35703_bmo-mir-2807b:mirbase
          Length = 84

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 64  cgtttgccgctaggggcgctgttccaactgcatacaaattcgagttaa 111
           ||||||||||||||  |||||||||||||||||||||||| |||||||
Sbjct: 48  cgtttgccgctaggaacgctgttccaactgcatacaaatttgagttaa 1




>35697_bmo-mir-2807a-1:mirbase
          Length = 96

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 65  gtttgccgctaggggcgctgttccaactgcatacaaatt 103
           |||||||||||||||| |||||||| |||||||||||||
Sbjct: 45  gtttgccgctaggggcactgttccagctgcatacaaatt 83




>35698_bmo-mir-2807a-2:mirbase
          Length = 95

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 65  gtttgccgctaggggcgctgttccaactgcatacaaatt 103
           |||||||||||||||| |||||||| |||||||||||||
Sbjct: 44  gtttgccgctaggggcactgttccagctgcatacaaatt 82



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                  
Query: 32 aaaagttagttcagatttgtatggagttcgagcgtttgcc 71
          ||||||||  ||| |||||||||||||| || ||||||||
Sbjct: 1  aaaagttaagtcaaatttgtatggagttggaacgtttgcc 40




>35699_bmo-mir-2807a-3:mirbase
          Length = 96

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 69  gccgctaggggcgctgttccaactgcatacaaatt 103
           ||||||||||||||||||||| |||||||||||||
Sbjct: 49  gccgctaggggcgctgttccagctgcatacaaatt 83




>35702_bmo-mir-2807a-6:mirbase
          Length = 95

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 65  gtttgccgctaggggcgctgttccaactgcatacaaatt 103
           ||||||| ||||||||||||||||| |||||||||||||
Sbjct: 44  gtttgccactaggggcgctgttccagctgcatacaaatt 82




>35700_bmo-mir-2807a-4:mirbase
          Length = 96

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 65  gtttgccgctaggggcgctgttccaactgcatacaaatt 103
           ||||| |||||||||| |||||||| |||||||||||||
Sbjct: 45  gtttgtcgctaggggcactgttccagctgcatacaaatt 83




>35871_bmo-mir-3295:mirbase
          Length = 113

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                           
Query: 121 atcgagaacgttaaataactcgccctaagcac 152
           |||||||| |||||||||||||| ||||||||
Sbjct: 83  atcgagaa-gttaaataactcgcgctaagcac 113