miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>35921_bmo-mir-3351:mirbase
          Length = 90

 Score = 69.9 bits (35), Expect = 7e-13
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                 
Query: 3  gtagcgcatttacgttgtggatgtctatgggctccagta 41
          |||||||||||||||||||||||||||||||| ||||||
Sbjct: 1  gtagcgcatttacgttgtggatgtctatgggcgccagta 39




>35843_bmo-mir-3267c:mirbase
          Length = 93

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 9  catttacgttgtggatgtctatgggctccagta 41
          |||||||||||| |||||||||||||| |||||
Sbjct: 1  catttacgttgtagatgtctatgggcttcagta 33




>35849_bmo-mir-3273:mirbase
          Length = 141

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 8   gcatttacgttgtggatgtctatgggctcc 37
           ||||||||||||| |||||||| |||||||
Sbjct: 103 gcatttacgttgtagatgtctacgggctcc 74