miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>35778_bmo-mir-3204a:mirbase
          Length = 107

 Score =  111 bits (56), Expect = 6e-26
 Identities = 63/64 (98%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                      
Query: 7  aggcccgcgtcataaacttcccatatgatttcccatatgggagtttatgaacttaggctt 66
          ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 23 aggcccgcgtcataaacttcccatatgatttcccatatgggagtttatg-acttaggctt 81

              
Query: 67 cgtt 70
          ||||
Sbjct: 82 cgtt 85




>35779_bmo-mir-3204b:mirbase
          Length = 88

 Score = 95.6 bits (48), Expect = 4e-21
 Identities = 61/64 (95%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                      
Query: 7  aggcccgcgtcataaacttcccatatgatttcccatatgggagtttatgaacttaggctt 66
          ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 16 aggcctgcgtcataaacttcccatatgatttcccatatgggagtttatg-acttgggctt 74

              
Query: 67 cgtt 70
          ||||
Sbjct: 75 cgtt 78