miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34354_dre-mir-199-3:mirbase
Length = 98
Score = 157 bits (79), Expect = 2e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 16 gcctgcccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacat 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gcctgcccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacat 70
Query: 76 tggttaggctgggcagggacaca 98
|||||||||||||| ||||||||
Sbjct: 71 tggttaggctgggctgggacaca 93
>34627_fru-mir-199-3:mirbase
Length = 99
Score = 101 bits (51), Expect = 9e-23
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 16 gcctgcccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacat 75
|||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 12 gcctgcccagtgttcagactacctgttcatcagactaaagctgaacagtagtctgcacat 71
Query: 76 tggttaggctgggcagggacaca 98
|||||| |||||| ||||||||
Sbjct: 72 tggttaagctgggttgggacaca 94
>34774_tni-mir-199-3:mirbase
Length = 95
Score = 91.7 bits (46), Expect = 9e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 16 gcctgcccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacat 75
|||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 10 gcctgcccagtgttcagactacctgttcatcagactcaagctgaacagtagtctgcacat 69
Query: 76 tggtta 81
||||||
Sbjct: 70 tggtta 75
>34626_fru-mir-199-2:mirbase
Length = 73
Score = 61.9 bits (31), Expect = 8e-11
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 16 gcctgcccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacat 75
||||||||||||||||||||||||||||| | | | | || ||||||||| ||||||
Sbjct: 3 gcctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacat 62
Query: 76 tggttaggctg 86
|||||||||||
Sbjct: 63 tggttaggctg 73
>34773_tni-mir-199-2:mirbase
Length = 73
Score = 61.9 bits (31), Expect = 8e-11
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 16 gcctgcccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacat 75
||||||||||||||||||||||||||||| | | | | || ||||||||| ||||||
Sbjct: 3 gcctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcacat 62
Query: 76 tggttaggctg 86
|||||||||||
Sbjct: 63 tggttaggctg 73
>25818_xtr-mir-199a:mirbase
Length = 96
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 19 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 78
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 79 agactgggca 88
>25989_gga-mir-199-2:mirbase
Length = 108
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 29 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 88
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 89 agactgggca 98
>26496_tgu-mir-199-2:mirbase
Length = 128
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 26 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 85
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 86 agactgggca 95
>26497_tgu-mir-199-2:mirbase
Length = 128
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 26 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 85
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 86 agactgggca 95
>27582_lla-mir-199a:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>27623_sla-mir-199a:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>27795_mml-mir-199a-1:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>28231_mne-mir-199a:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>28326_ggo-mir-199a:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>28514_hsa-mir-199a-2:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>28515_hsa-mir-199a-2:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>30115_ppa-mir-199a:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>30277_ptr-mir-199a-2:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>30892_ppy-mir-199a:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>30893_ppy-mir-199a-2:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>30894_ppy-mir-199a-2:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>31527_oan-mir-199:mirbase
Length = 118
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>31920_mmu-mir-199a-2:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>31921_mmu-mir-199a-2:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>32786_rno-mir-199a:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>32787_rno-mir-199a:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>33272_bta-mir-199a-1:mirbase
Length = 104
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>33273_bta-mir-199a-1:mirbase
Length = 104
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 91 agactgggca 100
>34772_tni-mir-199-1:mirbase
Length = 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
||||||||||||||||||||||||| | | | | || ||||||||| |||||||||||
Sbjct: 14 cccagtgttcagactacctgttcattgtcatactggtgtacagtagtctgcacattggtt 73
Query: 81 aggctgggca 90
|| |||||||
Sbjct: 74 agactgggca 83
>34353_dre-mir-199-2:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 16 gcctgcccagtgttcagactacctgttca 44
|||||||||||||||||||||||||||||
Sbjct: 25 gcctgcccagtgttcagactacctgttca 53
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgg 87
||||||||| ||||||||||||||||||
Sbjct: 69 acagtagtctgcacattggttaggctgg 96
>34029_ssc-mir-199a-1:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| | ||| | || ||||||||| |||||||||||
Sbjct: 9 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 68
Query: 81 aggctggg 88
|| |||||
Sbjct: 69 agactggg 76
>25988_gga-mir-199-1:mirbase
Length = 94
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 ctgcccagtgttcagactacctgttca 44
|||||||||||||||||||||||||||
Sbjct: 12 ctgcccagtgttcagactacctgttca 38
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctg 86
||||||||| |||||||||||||||||
Sbjct: 54 acagtagtctgcacattggttaggctg 80
>27417_mdo-mir-199b:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgggc 89
||||||||| ||||||||||||||||||||
Sbjct: 54 acagtagtctgcacattggttaggctgggc 83
>28516_hsa-mir-199b:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgggc 89
||||||||| ||||||||||||||||||||
Sbjct: 65 acagtagtctgcacattggttaggctgggc 94
>28517_hsa-mir-199b:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgggc 89
||||||||| ||||||||||||||||||||
Sbjct: 65 acagtagtctgcacattggttaggctgggc 94
>30278_ptr-mir-199b:mirbase
Length = 109
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgggc 89
||||||||| ||||||||||||||||||||
Sbjct: 65 acagtagtctgcacattggttaggctgggc 94
>31922_mmu-mir-199b:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgggc 89
||||||||| ||||||||||||||||||||
Sbjct: 65 acagtagtctgcacattggttaggctgggc 94
>33276_bta-mir-199b:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgggc 89
||||||||| ||||||||||||||||||||
Sbjct: 55 acagtagtctgcacattggttaggctgggc 84
>34030_ssc-mir-199a-2:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgggc 89
||||||||| ||||||||||||||||||||
Sbjct: 51 acagtagtctgcacattggttaggctgggc 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 10 cccagtgttcagactacctgttca 33
>34031_ssc-mir-199a-2:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgggc 89
||||||||| ||||||||||||||||||||
Sbjct: 51 acagtagtctgcacattggttaggctgggc 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 10 cccagtgttcagactacctgttca 33
>34352_dre-mir-199-1:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| || | | | || ||||||||| |||||||||||
Sbjct: 15 cccagtgttcagactacctgttcaggatcatactggtgtacagtagtctgcacattggtt 74
Query: 81 ag 82
||
Sbjct: 75 ag 76
>34625_fru-mir-199-1:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgctgcagctgaacagtagtccgcacattggtt 80
|||||||||||||||||||||||| || | | | || ||||||||| |||||||||||
Sbjct: 15 cccagtgttcagactacctgttcaggattttactggtgtacagtagtctgcacattggtt 74
Query: 81 ag 82
||
Sbjct: 75 ag 76
>26494_tgu-mir-199-1:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 gcccagtgttcagactacctgttca 44
|||||||||||||||||||||||||
Sbjct: 1 gcccagtgttcagactacctgttca 25
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctg 86
||||||||| |||||||||||||||||
Sbjct: 41 acagtagtctgcacattggttaggctg 67
>26495_tgu-mir-199-1:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 gcccagtgttcagactacctgttca 44
|||||||||||||||||||||||||
Sbjct: 1 gcccagtgttcagactacctgttca 25
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctg 86
||||||||| |||||||||||||||||
Sbjct: 41 acagtagtctgcacattggttaggctg 67
>31918_mmu-mir-199a-1:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 3e-07
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgct-gcagctgaacagtagtccgcacattggt 79
|||||||||||||||||||||||| | ||| | | || ||||||||| ||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggacatgtacagtagtctgcacattggt 65
Query: 80 taggc 84
|||||
Sbjct: 66 taggc 70
>31919_mmu-mir-199a-1:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 3e-07
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttcatcatgct-gcagctgaacagtagtccgcacattggt 79
|||||||||||||||||||||||| | ||| | | || ||||||||| ||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggacatgtacagtagtctgcacattggt 65
Query: 80 taggc 84
|||||
Sbjct: 66 taggc 70
>33793_bta-mir-3604-1:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 60 acagtagtccgcacattggttaggctggg 88
||||||||| |||||||||||||||||||
Sbjct: 29 acagtagtctgcacattggttaggctggg 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 70 cccagtgttcagactacctgttca 47
>25517_pma-mir-199a:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 11 cccagtgttcagactacctgttca 34
>27083_eca-mir-199a:mirbase
Length = 61
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttca 24
>27084_eca-mir-199a:mirbase
Length = 61
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttca 24
>27796_mml-mir-199a-2:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttca 29
>27797_mml-mir-199a-2:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttca 29
>28512_hsa-mir-199a-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttca 29
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggc 84
||||||||| |||||||||||||||
Sbjct: 47 acagtagtctgcacattggttaggc 71
>28513_hsa-mir-199a-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttca 29
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggc 84
||||||||| |||||||||||||||
Sbjct: 47 acagtagtctgcacattggttaggc 71
>30276_ptr-mir-199a-1:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttca 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttagg 83
||||||||| ||||||||||||||
Sbjct: 47 acagtagtctgcacattggttagg 70
>33274_bta-mir-199a-2:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttca 29
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggc 84
||||||||| |||||||||||||||
Sbjct: 47 acagtagtctgcacattggttaggc 71
>33275_bta-mir-199a-2:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 cccagtgttcagactacctgttca 44
||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttca 29
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggc 84
||||||||| |||||||||||||||
Sbjct: 47 acagtagtctgcacattggttaggc 71
>34032_ssc-mir-199b:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgg 87
||||||||| ||||||||||||||||||
Sbjct: 47 acagtagtctgcacattggttaggctgg 74
>25518_pma-mir-199b:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 18 ctgcccagtgttcagactacctgttca 44
||||||||||||| |||||||||||||
Sbjct: 8 ctgcccagtgttctgactacctgttca 34
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctggg 88
||||||||| ||||||||||||| |||||
Sbjct: 51 acagtagtctgcacattggttagactggg 79
>26756_cfa-mir-199-1:mirbase
Length = 61
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ccagtgttcagactacctgttca 44
|||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttca 23
>26757_cfa-mir-199-2:mirbase
Length = 59
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ccagtgttcagactacctgttca 44
|||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttca 23
>33794_bta-mir-3604-2:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 60 acagtagtccgcacattggttaggctg 86
||||||||| |||||||||||||||||
Sbjct: 27 acagtagtctgcacattggttaggctg 1
>30895_ppy-mir-199b:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgggc 89
|||||| || ||||||||||||||||||||
Sbjct: 66 acagtattctgcacattggttaggctgggc 95
>30896_ppy-mir-199b:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggctgggc 89
|||||| || ||||||||||||||||||||
Sbjct: 66 acagtattctgcacattggttaggctgggc 95
>27085_eca-mir-199b:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggc 84
||||||||| |||||||||||||||
Sbjct: 45 acagtagtctgcacattggttaggc 69
>27086_eca-mir-199b:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 60 acagtagtccgcacattggttaggc 84
||||||||| |||||||||||||||
Sbjct: 45 acagtagtctgcacattggttaggc 69
