miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>34305_dre-mir-137-1:mirbase
          Length = 85

 Score =  168 bits (85), Expect = 5e-43
 Identities = 85/85 (100%)
 Strand = Plus / Plus

                                                                      
Query: 8  ggctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgctta 67
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ggctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgctta 60

                                   
Query: 68 agaatacgcgtagttgaggagagtc 92
          |||||||||||||||||||||||||
Sbjct: 61 agaatacgcgtagttgaggagagtc 85




>34306_dre-mir-137-2:mirbase
          Length = 128

 Score =  161 bits (81), Expect = 1e-40
 Identities = 84/85 (98%)
 Strand = Plus / Plus

                                                                       
Query: 10  ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27  ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 86

                                    
Query: 70  aatacgcgtagttgaggagagtcat 94
           |||||||||||| ||||||||||||
Sbjct: 87  aatacgcgtagtcgaggagagtcat 111




>25782_xtr-mir-137-1:mirbase
          Length = 101

 Score =  143 bits (72), Expect = 3e-35
 Identities = 81/84 (96%)
 Strand = Plus / Plus

                                                                      
Query: 8  ggctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgctta 67
          ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||
Sbjct: 8  ggctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgctta 67

                                  
Query: 68 agaatacgcgtagttgaggagagt 91
          ||||||||||||||||||||||||
Sbjct: 68 agaatacgcgtagttgaggagagt 91




>25783_xtr-mir-137-2:mirbase
          Length = 101

 Score =  143 bits (72), Expect = 3e-35
 Identities = 81/84 (96%)
 Strand = Plus / Plus

                                                                      
Query: 8  ggctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgctta 67
          ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||
Sbjct: 8  ggctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgctta 67

                                  
Query: 68 agaatacgcgtagttgaggagagt 91
          ||||||||||||||||||||||||
Sbjct: 68 agaatacgcgtagttgaggagagt 91




>25784_xtr-mir-137-3:mirbase
          Length = 101

 Score =  143 bits (72), Expect = 3e-35
 Identities = 81/84 (96%)
 Strand = Plus / Plus

                                                                      
Query: 8  ggctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgctta 67
          ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||
Sbjct: 8  ggctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgctta 67

                                  
Query: 68 agaatacgcgtagttgaggagagt 91
          ||||||||||||||||||||||||
Sbjct: 68 agaatacgcgtagttgaggagagt 91




>25958_gga-mir-137:mirbase
          Length = 96

 Score =  131 bits (66), Expect = 1e-31
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
          ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||
Sbjct: 6  ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 65

                                
Query: 70 aatacgcgtagttgaggagagt 91
          |||||||||||| |||||||||
Sbjct: 66 aatacgcgtagtcgaggagagt 87




>27739_mml-mir-137:mirbase
          Length = 102

 Score =  131 bits (66), Expect = 1e-31
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
          ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70

                                
Query: 70 aatacgcgtagttgaggagagt 91
          |||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92




>28453_hsa-mir-137:mirbase
          Length = 102

 Score =  131 bits (66), Expect = 1e-31
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
          ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70

                                
Query: 70 aatacgcgtagttgaggagagt 91
          |||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92




>30228_ptr-mir-137:mirbase
          Length = 101

 Score =  131 bits (66), Expect = 1e-31
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
          ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70

                                
Query: 70 aatacgcgtagttgaggagagt 91
          |||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92




>30838_ppy-mir-137:mirbase
          Length = 102

 Score =  131 bits (66), Expect = 1e-31
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
          ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70

                                
Query: 70 aatacgcgtagttgaggagagt 91
          |||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92




>31493_oan-mir-137a:mirbase
          Length = 110

 Score =  131 bits (66), Expect = 1e-31
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
          ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||
Sbjct: 16 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 75

                                
Query: 70 aatacgcgtagttgaggagagt 91
          |||||||||||| |||||||||
Sbjct: 76 aatacgcgtagtcgaggagagt 97




>32740_rno-mir-137:mirbase
          Length = 102

 Score =  131 bits (66), Expect = 1e-31
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
          ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70

                                
Query: 70 aatacgcgtagttgaggagagt 91
          |||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92




>33222_bta-mir-137:mirbase
          Length = 102

 Score =  131 bits (66), Expect = 1e-31
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 10 ctctcttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaag 69
          ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||
Sbjct: 11 ctctcttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaag 70

                                
Query: 70 aatacgcgtagttgaggagagt 91
          |||||||||||| |||||||||
Sbjct: 71 aatacgcgtagtcgaggagagt 92




>34600_fru-mir-137:mirbase
          Length = 73

 Score =  129 bits (65), Expect = 4e-31
 Identities = 71/73 (97%)
 Strand = Plus / Plus

                                                                      
Query: 14 cttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaata 73
          ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 1  cttcggtgacgggtattcttgggtggataatacggatcacgttgttattgcttaagaata 60

                       
Query: 74 cgcgtagttgagg 86
          |||||||||||||
Sbjct: 61 cgcgtagttgagg 73




>26468_tgu-mir-137:mirbase
          Length = 73

 Score =  113 bits (57), Expect = 2e-26
 Identities = 69/73 (94%)
 Strand = Plus / Plus

                                                                      
Query: 18 ggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcg 77
          ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||
Sbjct: 1  ggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcg 60

                       
Query: 78 tagttgaggagag 90
          |||| ||||||||
Sbjct: 61 tagtcgaggagag 73




>27033_eca-mir-137:mirbase
          Length = 73

 Score =  113 bits (57), Expect = 2e-26
 Identities = 69/73 (94%)
 Strand = Plus / Plus

                                                                      
Query: 14 cttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaata 73
          ||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||
Sbjct: 1  cttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaata 60

                       
Query: 74 cgcgtagttgagg 86
          |||||||| ||||
Sbjct: 61 cgcgtagtcgagg 73




>31867_mmu-mir-137:mirbase
          Length = 73

 Score =  113 bits (57), Expect = 2e-26
 Identities = 69/73 (94%)
 Strand = Plus / Plus

                                                                      
Query: 14 cttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaata 73
          ||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||
Sbjct: 1  cttcggtgacgggtattcttgggtggataatacggattacgttgttattgcttaagaata 60

                       
Query: 74 cgcgtagttgagg 86
          |||||||| ||||
Sbjct: 61 cgcgtagtcgagg 73




>26710_cfa-mir-137:mirbase
          Length = 55

 Score = 85.7 bits (43), Expect = 5e-18
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                 
Query: 24 gggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcgt 78
          ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||
Sbjct: 1  gggtattcttgggtggataatacggattacgttgttattgcttaagaatacgcgt 55




>27385_mdo-mir-137:mirbase
          Length = 56

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                  
Query: 31 cttgggtggataatacggctctcgttgttattgcttaagaatacgcgtagttgagg 86
          |||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||
Sbjct: 1  cttgggtggataatacggattacgttgttattgcttaagaatacgcgtagtcgagg 56




>31494_oan-mir-137b:mirbase
          Length = 100

 Score = 71.9 bits (36), Expect = 8e-14
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                      
Query: 15 ttcggtgacgggtattcttgggtggataatacggctctcgttgttattgcttaagaatac 74
          |||| ||||||||||||||||||  ||||||||| |  || ||||||||||| |||||||
Sbjct: 10 ttcgatgacgggtattcttgggtacataatacggatggcgctgttattgcttgagaatac 69

                      
Query: 75 gcgtagttgagg 86
          ||||||| ||||
Sbjct: 70 gcgtagtcgagg 81




>34747_tni-mir-137:mirbase
          Length = 70

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                      
Query: 22 acgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcgtagt 81
          |||||||||||||||| |||||||| | | | | ||||||||||| ||||||||||||||
Sbjct: 7  acgggtattcttgggttgataatacagatgtggatgttattgcttgagaatacgcgtagt 66




>25490_pma-mir-137-2:mirbase
          Length = 89

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                     
Query: 22 acgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcgtag 80
          ||||||||||||||||  ||||||| | |  |||||||||||||||||||||| |||||
Sbjct: 17 acgggtattcttgggtatataatacagattgcgttgttattgcttaagaatacacgtag 75




>25489_pma-mir-137-1:mirbase
          Length = 89

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                      
Query: 21 gacgggtattcttgggtggataatacggctctcgttgttattgcttaagaatacgcgtag 80
          |||| ||||||||||||  ||||||||  || || ||||||||||||||||||| |||||
Sbjct: 16 gacgcgtattcttgggtaaataatacgtttcccgctgttattgcttaagaatacacgtag 75




>35194_aae-mir-137-1:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 54 gttgttattgcttaagaatacgcgtagttga 84
          ||||||||||||| ||||||| |||||||||
Sbjct: 58 gttgttattgcttgagaatacacgtagttga 88




>35195_aae-mir-137-2:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 54 gttgttattgcttaagaatacgcgtagttga 84
          ||||||||||||| ||||||| |||||||||
Sbjct: 60 gttgttattgcttgagaatacacgtagttga 90




>35292_aga-mir-137:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 54 gttgttattgcttaagaatacgcgtagttga 84
          ||||||||||||| ||||||| |||||||||
Sbjct: 50 gttgttattgcttgagaatacacgtagttga 80




>36024_cqu-mir-137:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 54 gttgttattgcttaagaatacgcgtagttga 84
          ||||||||||||| ||||||| |||||||||
Sbjct: 48 gttgttattgcttgagaatacacgtagttga 78




>35064_api-mir-137:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 56 tgttattgcttaagaatacgcgtagttga 84
          ||||||||||| ||||||| |||||||||
Sbjct: 49 tgttattgcttgagaatacacgtagttga 77