miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41548_sly-MIR399:mirbase
          Length = 71

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 60/70 (85%), Gaps = 5/70 (7%)
 Strand = Plus / Plus

                                                                      
Query: 22 tagggctactctctattggcatgcag--tgat---atatttaagctgacatgccaaagga 76
          ||||||||| |||||||||||||||   ||||   |||||| |||||| |||||||||||
Sbjct: 1  tagggctacactctattggcatgcaacttgatcaaatatttgagctgaaatgccaaagga 60

                    
Query: 77 gagctgccct 86
          ||| ||||||
Sbjct: 61 gagttgccct 70




>42822_zma-MIR399d:mirbase
          Length = 125

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 66  atgccaaaggagagctgccctg 87
           ||||||||||||||||||||||
Sbjct: 85  atgccaaaggagagctgccctg 106




>40732_mtr-MIR399b:mirbase
          Length = 112

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 67 tgccaaaggagagctgccctgt 88
          ||||||||||||||||||||||
Sbjct: 73 tgccaaaggagagctgccctgt 94




>40386_rco-MIR399d:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 67 tgccaaaggagagctgccctgt 88
          ||||||||||||||||||||||
Sbjct: 78 tgccaaaggagagctgccctgt 99




>42590_sbi-MIR399b:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 67  tgccaaaggagagctgccctg 87
           |||||||||||||||||||||
Sbjct: 82  tgccaaaggagagctgccctg 102




>42049_osa-MIR399i:mirbase
          Length = 116

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 67  tgccaaaggagagctgccctg 87
           |||||||||||||||||||||
Sbjct: 86  tgccaaaggagagctgccctg 106




>41249_csi-MIR399d:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 61  ctgacatgccaaaggagagctgccctgttactg 93
           |||| |||||||||||||| |||||||| ||||
Sbjct: 94  ctgatatgccaaaggagagttgccctgtgactg 126




>40745_mtr-MIR399o:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 67 tgccaaaggagagctgccctg 87
          |||||||||||||||||||||
Sbjct: 67 tgccaaaggagagctgccctg 87




>41669_vvi-MIR399b:mirbase
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 62  tgacatgccaaaggagagctgccctgttactg 93
           |||| ||||||||||||| |||||||| ||||
Sbjct: 82  tgacttgccaaaggagagttgccctgtgactg 113




>40744_mtr-MIR399n:mirbase
          Length = 100

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 67 tgccaaaggagagctgccct 86
          ||||||||||||||||||||
Sbjct: 75 tgccaaaggagagctgccct 94




>40743_mtr-MIR399m:mirbase
          Length = 85

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 67 tgccaaaggagagctgccct 86
          ||||||||||||||||||||
Sbjct: 60 tgccaaaggagagctgccct 79




>40734_mtr-MIR399d:mirbase
          Length = 129

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 67  tgccaaaggagagctgccct 86
           ||||||||||||||||||||
Sbjct: 90  tgccaaaggagagctgccct 109