miRNEST 2.0, an integrative microRNA resource :: BLAST
>41237_csi-MIR390:mirbase
Length = 154
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttcttc 138
|||||||||||||||||||||||| ||||||
Sbjct: 99 cgctatccatcctgagtttcatggcttcttc 129
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 12 gaagaatctgtatagctcaagagggatagcgcca 45
||||||||||| |||||| ||||||||||||||
Sbjct: 9 gaagaatctgttaagctcaggagggatagcgcca 42
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttcttc 138
||||||| |||||||||||||||||||||||
Sbjct: 80 cgctatctatcctgagtttcatgggttcttc 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 14 agaatctgtatagctcaagagggatagcgcca 45
|||||||||| |||||| ||||||||||||||
Sbjct: 11 agaatctgtaaagctcaggagggatagcgcca 42
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttcttc 138
|||||||||||||||||||||| ||||||||
Sbjct: 89 cgctatccatcctgagtttcatcggttcttc 119
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttcttc 138
|||||||||||||||||||||| ||||||||
Sbjct: 95 cgctatccatcctgagtttcatcggttcttc 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 10 tggaagaatctgtatagctcaagagggatagcgcca 45
||||||||||||| |||||| ||||||||||||||
Sbjct: 4 tggaagaatctgttaagctcaggagggatagcgcca 39
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttcttc 138
|||||||||||||||||||||| ||||||||
Sbjct: 92 cgctatccatcctgagtttcatcggttcttc 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 10 tggaagaatctgtatagctcaagagggatagcgcca 45
||||||||||||| |||||| ||||||||||||||
Sbjct: 1 tggaagaatctgttaagctcaggagggatagcgcca 36
>40293_bna-MIR390b:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 gaagaatctgtatagctcaagagggatagcgcca 45
|||||||||||| |||||| ||||||||||||||
Sbjct: 6 gaagaatctgtaaagctcaggagggatagcgcca 39
>40072_ath-MIR390a:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 gaagaatctgtatagctcaagagggatagcgcca 45
|||||||||||| |||||| ||||||||||||||
Sbjct: 6 gaagaatctgtaaagctcaggagggatagcgcca 39
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttcttc 138
|||||||||||||||||||||| || |||||
Sbjct: 70 cgctatccatcctgagtttcattggctcttc 100
>39862_aly-MIR390a:mirbase
Length = 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 gaagaatctgtatagctcaagagggatagcgcca 45
|||||||||||| |||||| ||||||||||||||
Sbjct: 17 gaagaatctgtaaagctcaggagggatagcgcca 50
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttcttc 138
|||||||||||||||||||||| || |||||
Sbjct: 81 cgctatccatcctgagtttcattggctcttc 111
>40468_gma-MIR390a:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttct 136
|||||||||||||||||||||||| ||||
Sbjct: 68 cgctatccatcctgagtttcatggcttct 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 14 agaatctgtatagctcaagagggatagcgcca 45
|||||||||| |||||| ||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgcca 32
>40467_gma-MIR390a:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttct 136
|||||||||||||||||||||||| ||||
Sbjct: 68 cgctatccatcctgagtttcatggcttct 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 14 agaatctgtatagctcaagagggatagcgcca 45
|||||||||| |||||| ||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgcca 32
>40705_mtr-MIR390:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgg 131
||||||||||||||||||||||||
Sbjct: 77 cgctatccatcctgagtttcatgg 100
>41640_vvi-MIR390:mirbase
Length = 140
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttcttc 138
||||||| ||||||||||||| |||||||||
Sbjct: 110 cgctatctatcctgagtttcacgggttcttc 140
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 14 agaatctgtatagctcaagagggatagcgcca 45
||||||||| |||||| ||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggtt 134
|||||||||||||||||||||| ||||
Sbjct: 88 cgctatccatcctgagtttcatcggtt 114
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 14 agaatctgtatagctcaagagggatagcgcca 45
||||||||| |||||| ||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
>40294_bna-MIR390c:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcatgggttcttc 138
|||||||||||||||||| ||||| ||||||
Sbjct: 86 cgctatccatcctgagttccatggcttcttc 116
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcat 129
||||||||||||||||||||||
Sbjct: 80 cgctatccatcctgagtttcat 101
>40372_rco-MIR390b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttcat 129
||||||||||||||||||||||
Sbjct: 97 cgctatccatcctgagtttcat 118
>40371_rco-MIR390a:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 108 cgctatccatcctgagtttca 128
|||||||||||||||||||||
Sbjct: 83 cgctatccatcctgagtttca 103
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 14 agaatctgtatagctcaagagggatagcgcca 45
||||||||| |||||| ||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
