miRNEST 2.0, an integrative microRNA resource :: BLAST
>40464_gma-MIR319a:mirbase
Length = 207
Score = 232 bits (117), Expect = 9e-62
Identities = 170/185 (91%), Gaps = 2/185 (1%)
Strand = Plus / Plus
Query: 15 aggtaagtgagctttcttcagtccactcataggtggcagtaagattcaattagctgccga 74
||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 15 aggtaagagagctttcttcagtccactcatgggtgacagtaagattcaattagctgccga 74
Query: 75 ctcattcatccaaatgctgagtagtgatactcttaaagatactcatcaaatgagtgaatg 134
|||||||||||||||| ||||| || | | |||| ||||||| || |||||||||||
Sbjct: 75 ctcattcatccaaatgttgagt-gtaag-cgaataaatatactcagcagatgagtgaatg 132
Query: 135 atgcgggagacaaattgattcttaagtttcctgtacttggactgaagggagctccctttt 194
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atgcgggagacaaattgaatcttaagtttcctgtacttggactgaagggagctccctttt 192
Query: 195 ccttt 199
|||||
Sbjct: 193 ccttt 197
>40465_gma-MIR319b:mirbase
Length = 208
Score = 214 bits (108), Expect = 2e-56
Identities = 169/186 (90%), Gaps = 5/186 (2%)
Strand = Plus / Plus
Query: 16 ggtaagtgagctttcttcagtccactcataggtggcagtaagatt-caattagctgccga 74
|||||| ||||||||||||||||||| || |||| || ||||||| ||||||||||||||
Sbjct: 16 ggtaagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccga 75
Query: 75 ctcattcatccaaatgctgagtagtgata-ctcttaaagatactcatcaaatgagtgaat 133
|||||||||||||||||||||| || | | ||||||||||| |||||||||||||
Sbjct: 76 ctcattcatccaaatgctgagt---gaaagcgaagaaagatactcagcaaatgagtgaat 132
Query: 134 gatgcgggagacaaattgattcttaagtttcctgtacttggactgaagggagctcccttt 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gatgcgggagacaaattgattcttaagtttcctgtacttggactgaagggagctcccttt 192
Query: 194 tccttt 199
| ||||
Sbjct: 193 ttcttt 198
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 174 bits (88), Expect = 2e-44
Identities = 159/180 (88%), Gaps = 2/180 (1%)
Strand = Plus / Plus
Query: 18 taagtgagctttcttcagtccactcataggtggcagtaagatt-caattagctgccgact 76
|||| |||||||||| ||||||||||| |||| || ||||||| ||||||||||| ||||
Sbjct: 1 taagagagctttctttagtccactcatgggtgacaataagatttcaattagctgctgact 60
Query: 77 cattcatccaaatgctgagtagtg-atactcttaaagatactcatcaaatgagtgaatga 135
|||||||||||||| |||||| ||| | | |||||||||||||||||||||||
Sbjct: 61 cattcatccaaatgttgagtaaaatatatagaaacatatactcatcaaatgagtgaatga 120
Query: 136 tgcgggagacaaattgattcttaagtttcctgtacttggactgaagggagctcccttttc 195
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 121 tgcgggagacaaattgaatcttaagtttcctatacttggactgaagggagctcccttttc 180
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 147 bits (74), Expect = 4e-36
Identities = 153/177 (86%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 18 taagtgagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactc 77
|||| |||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||
Sbjct: 8 taagagagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactc 67
Query: 78 attcatccaaatgctgagtagtgatactcttaaagat-actcatcaaatgagtgaatgat 136
|||||||||||| |||||| | | | |||| || || |||||||||||||||
Sbjct: 68 attcatccaaatactgagt--taaaggacaaggagattacccagtaaatgagtgaatgat 125
Query: 137 gcgggagacaaattgattcttaagtttcctgtacttggactgaagggagctcccttt 193
|||||||||||||||| || |||| ||||||||||||||||||||||||||||||||
Sbjct: 126 gcgggagacaaattgaatcctaagcttcctgtacttggactgaagggagctcccttt 182
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 129 bits (65), Expect = 9e-31
Identities = 144/171 (84%), Gaps = 12/171 (7%)
Strand = Plus / Plus
Query: 23 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 82
|||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 13 gagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactcattca 72
Query: 83 tccaaatgctgagtagtgatactcttaaaga-tactcatcaaatgagtgaatgatgcggg 141
||||||| ||| | |||| || ||| || |||||| |||||||||||||
Sbjct: 73 tccaaatactg-----------tgttaaggactacccagtaaatgattgaatgatgcggg 121
Query: 142 agacaaattgattcttaagtttcctgtacttggactgaagggagctccctt 192
|||||||||| ||||||| | ||||| |||||||||||||||||||||||
Sbjct: 122 agacaaattggatcttaagctccctgtgcttggactgaagggagctccctt 172
>40367_rco-MIR319a:mirbase
Length = 211
Score = 127 bits (64), Expect = 4e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 122 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 181
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 137 aaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactgaag 196
Query: 182 ggagctcccttt 193
||||||||||||
Sbjct: 197 ggagctcccttt 208
Score = 109 bits (55), Expect = 9e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 18 taagtgagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactc 77
|||| |||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||
Sbjct: 2 taagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactc 61
Query: 78 attcatccaaatgctgagt 96
|||||||||||| ||||||
Sbjct: 62 attcatccaaatactgagt 80
>41282_ctr-MIR319:mirbase
Length = 186
Score = 123 bits (62), Expect = 6e-29
Identities = 144/169 (85%), Gaps = 3/169 (1%)
Strand = Plus / Plus
Query: 23 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 82
||||||||||| ||||||| || ||||||| || |||| |||||||||| ||||||||||
Sbjct: 10 gagctttcttcggtccacttatgggtggcaataggatttaattagctgctgactcattca 69
Query: 83 tccaaatgctgagtagtgatactcttaaag-atactcatcaaatgagtgaatgatgcggg 141
||||||| || |||| | || || | |||| || ||||||||||||||||||||
Sbjct: 70 tccaaatacttagtaaaggg--tcgaaatggatacccagtaaatgagtgaatgatgcggg 127
Query: 142 agacaaattgattcttaagtttcctgtacttggactgaagggagctccc 190
||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 128 agacaaattgaatcttaagcttcctgtgcttggactgaagggagctccc 176
>41185_aqc-MIR319:mirbase
Length = 177
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 23 gagctttcttcagtccactcataggtggcagtaagattcaattagctgccgactcattca 82
||||| |||||||||||||||||||| | ||| |||||||||| ||||||||||||||||
Sbjct: 4 gagctctcttcagtccactcataggtagtagtcagattcaatttgctgccgactcattca 63
Query: 83 tcca 86
||||
Sbjct: 64 tcca 67
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 122 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 181
|||||| |||||||| ||||||| ||||| ||||| | ||| ||||||||||||||||
Sbjct: 106 aaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactgaag 165
Query: 182 ggagctccct 191
||||||||||
Sbjct: 166 ggagctccct 175
>41544_sly-MIR319:mirbase
Length = 168
Score = 77.8 bits (39), Expect = 3e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 116 ctcatcaaatgagtgaatgatgcgggag-acaaattgattcttaagtttcctgtacttgg 174
|||| ||| ||||||||||| ||||||| |||| |||| |||| || |||||||||||||
Sbjct: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
Query: 175 actgaagggagctcc 189
|||||||||||||||
Sbjct: 154 actgaagggagctcc 168
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 71.9 bits (36), Expect = 2e-13
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 122 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 181
|||||| ||| |||||||||||||||||| | |||||| ||||| | |||||||||||
Sbjct: 108 aaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggactgaag 167
Query: 182 ggagctcccttt 193
||||||||||||
Sbjct: 168 ggagctcccttt 179
>40070_ath-MIR319b:mirbase
Length = 172
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 122 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 181
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 103 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 162
Query: 182 ggagctccct 191
||||||||||
Sbjct: 163 ggagctccct 172
>39859_aly-MIR319b:mirbase
Length = 246
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 122 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 181
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 142 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 201
Query: 182 ggagctccct 191
||||||||||
Sbjct: 202 ggagctccct 211
>40069_ath-MIR319a:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 57 gattcaattagctgccgactcattcatccaaat 89
||||||||||||| |||||||||||||||||||
Sbjct: 40 gattcaattagcttccgactcattcatccaaat 72
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 ttggactgaagggagctccct 191
|||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccct 174
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 165 ctgtacttggactgaagggagctcccttt 193
|||| ||||||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctcccttt 187
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 attagctgccgactcattcatccaaa 88
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 165 ctgtacttggactgaagggagctcccttt 193
|||| ||||||||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctcccttt 190
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 18 taagtgagctttcttcagtccactcat 44
|||| ||||||||||||||||||||||
Sbjct: 8 taagagagctttcttcagtccactcat 34
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 attagctgccgactcattcatccaaa 88
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
>40703_mtr-MIR319:mirbase
Length = 207
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccctttt 194
|||||||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctccctttt 192
>40369_rco-MIR319c:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 165 ctgtacttggactgaagggagctcccttt 193
|||| ||||||||||||||||||||||||
Sbjct: 157 ctgtgcttggactgaagggagctcccttt 185
>39858_aly-MIR319a:mirbase
Length = 221
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 61 caattagctgccgactcattcatccaaat 89
||||||||| |||||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 122 aaatgagtgaatgatgcgggagacaaattg 151
|||||| |||||||||||| ||||||||||
Sbjct: 128 aaatgaatgaatgatgcggtagacaaattg 157
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 ttggactgaagggagctccct 191
|||||||||||||||||||||
Sbjct: 177 ttggactgaagggagctccct 197
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 165 ctgtacttggactgaagggagctccctt 192
|||| |||||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctccctt 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 attagctgccgactcattcatccaaa 88
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccctt 192
|||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccctt 184
>39740_smo-MIR319:mirbase
Length = 215
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccctt 192
|||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccctt 207
>42781_zma-MIR319b:mirbase
Length = 213
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 62 aattagctgccgactcattcatccaaatgc 91
||||||||||||||||||||| ||| ||||
Sbjct: 63 aattagctgccgactcattcacccacatgc 92
>42642_tae-MIR319:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccct 191
||||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctccct 204
>42563_sbi-MIR319:mirbase
Length = 249
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 62 aattagctgccgactcattcatccaaatgc 91
||||||||||||||||||||| ||| ||||
Sbjct: 75 aattagctgccgactcattcacccacatgc 104
>41995_osa-MIR319b:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 62 aattagctgccgactcattcatccaaatgc 91
||||||||||||||||||||| ||| ||||
Sbjct: 53 aattagctgccgactcattcacccacatgc 82
>41770_bdi-MIR319:mirbase
Length = 280
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccct 191
||||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctccct 246
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 aattagctgccgactcattcat 83
||||||||||||||||||||||
Sbjct: 55 aattagctgccgactcattcat 76
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 165 ctgtacttggactgaagggagctcc 189
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>40368_rco-MIR319b:mirbase
Length = 179
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccct 191
||||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccct 174
>42783_zma-MIR319d:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 63 attagctgccgactcattcatccaaatgc 91
|||||||||||||||||||| ||| ||||
Sbjct: 63 attagctgccgactcattcacccacatgc 91
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 165 ctgtacttggactgaagggagctcc 189
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccc 190
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccc 190
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctccc 190
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>42780_zma-MIR319a:mirbase
Length = 209
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 171 ttggactgaagggagctccctttt 194
||||||||||||| ||||||||||
Sbjct: 171 ttggactgaagggtgctccctttt 194
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 171 ttggactgaagggagctccc 190
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctcc 189
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctcc 189
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 170 cttggactgaagggagctcc 189
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
