miRNEST 2.0, an integrative microRNA resource :: BLAST
>27714_mml-mir-122a:mirbase
Length = 85
Score = 168 bits (85), Expect = 6e-43
Identities = 85/85 (100%)
Strand = Plus / Minus
Query: 17 gcctagtagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gcctagtagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 26
Query: 77 gtcacactccacagctctgctaagg 101
|||||||||||||||||||||||||
Sbjct: 25 gtcacactccacagctctgctaagg 1
>28426_hsa-mir-122:mirbase
Length = 85
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Minus
Query: 17 gcctagtagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 76
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gcctagcagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 26
Query: 77 gtcacactccacagctctgctaagg 101
|||||||||||||||||||||||||
Sbjct: 25 gtcacactccacagctctgctaagg 1
>30814_ppy-mir-122:mirbase
Length = 85
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Minus
Query: 17 gcctagtagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 76
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gcctagcagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 26
Query: 77 gtcacactccacagctctgctaagg 101
|||||||||||||||||||||||||
Sbjct: 25 gtcacactccacagctctgctaagg 1
>30207_ptr-mir-122:mirbase
Length = 84
Score = 151 bits (76), Expect = 1e-37
Identities = 82/84 (97%)
Strand = Plus / Minus
Query: 17 gcctagtagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 76
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 84 gcctagcagtagctatttagtgtgataatggcgtttgataatttagacacaaacaccatt 25
Query: 77 gtcacactccacagctctgctaag 100
||||||||||||||||||||||||
Sbjct: 24 gtcacactccacagctctgctaag 1
>33197_bta-mir-122:mirbase
Length = 85
Score = 147 bits (74), Expect = 2e-36
Identities = 77/78 (98%)
Strand = Plus / Minus
Query: 24 agtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacac 83
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 78 agtagctatttagtgtgataatggcgtttgatagtttggacacaaacaccattgtcacac 19
Query: 84 tccacagctctgctaagg 101
||||||||||||||||||
Sbjct: 18 tccacagctctgctaagg 1
>33967_ssc-mir-122:mirbase
Length = 85
Score = 147 bits (74), Expect = 2e-36
Identities = 77/78 (98%)
Strand = Plus / Minus
Query: 24 agtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacac 83
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 78 agtagctatttagtgtgataatggcgtttgatagtttggacacaaacaccattgtcacac 19
Query: 84 tccacagctctgctaagg 101
||||||||||||||||||
Sbjct: 18 tccacagctctgctaagg 1
>29379_hsa-mir-3591:mirbase
Length = 73
Score = 143 bits (72), Expect = 3e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 24 agtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacac 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacac 61
Query: 84 tccacagctctg 95
||||||||||||
Sbjct: 62 tccacagctctg 73
>29380_hsa-mir-3591:mirbase
Length = 73
Score = 143 bits (72), Expect = 3e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 24 agtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacac 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacac 61
Query: 84 tccacagctctg 95
||||||||||||
Sbjct: 62 tccacagctctg 73
>25937_gga-mir-122-1:mirbase
Length = 77
Score = 127 bits (64), Expect = 2e-30
Identities = 70/72 (97%)
Strand = Plus / Minus
Query: 24 agtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacac 83
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 72 agtagctatttagtgtgataatggcgtttgatagattggacacaaacaccattgtcacac 13
Query: 84 tccacagctctg 95
||||||||||||
Sbjct: 12 tccacagctctg 1
>27006_eca-mir-122:mirbase
Length = 66
Score = 123 bits (62), Expect = 3e-29
Identities = 65/66 (98%)
Strand = Plus / Minus
Query: 27 agctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacactcc 86
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 66 agctatttagtgtgataatggcgtttgatagtttggacacaaacaccattgtcacactcc 7
Query: 87 acagct 92
||||||
Sbjct: 6 acagct 1
>25938_gga-mir-122-2:mirbase
Length = 77
Score = 119 bits (60), Expect = 5e-28
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 24 agtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacac 83
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 72 agtagctatttagtgtgataatggcgtttgatagattggacacaaacaccattgtcacac 13
Query: 84 tccacagctctg 95
|||| |||||||
Sbjct: 12 tccatagctctg 1
>31478_oan-mir-122:mirbase
Length = 111
Score = 119 bits (60), Expect = 5e-28
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 24 agtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacac 83
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 92 agtagctatttagtgtgataatggcgtttgatagactggacacaaacaccattgtcacac 33
Query: 84 tccacagctctg 95
||||||||||||
Sbjct: 32 tccacagctctg 21
>33091_rno-mir-3591:mirbase
Length = 109
Score = 117 bits (59), Expect = 2e-27
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 12 ggattgcctagtagtagctatttagtgtgataatggcgtttgatagtttagacacaaaca 71
|||| |||||| ||||||| ||||||||||| |||||||||||| ||| ||||||||||
Sbjct: 7 ggatagcctagcagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaaca 66
Query: 72 ccattgtcacactccacagctctgctaagga 102
|||||||||||||||| ||||||||||||||
Sbjct: 67 ccattgtcacactccagagctctgctaagga 97
>31837_mmu-mir-122:mirbase
Length = 66
Score = 115 bits (58), Expect = 7e-27
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 27 agctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacactcc 86
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 66 agctatttagtgtgataatggcgtttgatggtttggacacaaacaccattgtcacactcc 7
Query: 87 acagct 92
||||||
Sbjct: 6 acagct 1
>32716_rno-mir-122:mirbase
Length = 85
Score = 113 bits (57), Expect = 3e-26
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 17 gcctagtagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 76
|||||| ||||||| ||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 85 gcctagcagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccatt 26
Query: 77 gtcacactccacagctctgctaagg 101
||||||||||| |||||||||||||
Sbjct: 25 gtcacactccagagctctgctaagg 1
>27371_mdo-mir-122:mirbase
Length = 74
Score = 111 bits (56), Expect = 1e-25
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 24 agtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacac 83
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 72 agtagctatttagtgtgataatggcgtttgatagactggacacaaacaccattgtcacac 13
Query: 84 tccacagctctg 95
|||| |||||||
Sbjct: 12 tccatagctctg 1
>26685_cfa-mir-122:mirbase
Length = 58
Score = 107 bits (54), Expect = 2e-24
Identities = 57/58 (98%)
Strand = Plus / Minus
Query: 30 tatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacactcca 87
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 58 tatttagtgtgataatggcgtttgatagtttggacacaaacaccattgtcacactcca 1
>26449_tgu-mir-122:mirbase
Length = 72
Score = 101 bits (51), Expect = 1e-22
Identities = 64/67 (95%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 29 ctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacactccac 88
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 68 ctatttagtgtgataatggcgtttgatagatg-gacacaaacaccattgtcacactccac 10
Query: 89 agctctg 95
|||||||
Sbjct: 9 agctctg 3
>34731_tni-mir-122:mirbase
Length = 66
Score = 91.7 bits (46), Expect = 1e-19
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 27 agctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacactcc 86
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 66 agctatttagtgtgataatggcgtttgaaagaaaggacacaaacaccattgtcacactcc 7
Query: 87 acagct 92
||||||
Sbjct: 6 acagct 1
>25762_xtr-mir-122:mirbase
Length = 69
Score = 89.7 bits (45), Expect = 4e-19
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 33 ttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacactccacagct 92
||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||
Sbjct: 61 ttagtgtgataatggcgtttgatagctctgacacaaacaccattgtcacactccatagct 2
Query: 93 c 93
|
Sbjct: 1 c 1
>34584_fru-mir-122:mirbase
Length = 66
Score = 75.8 bits (38), Expect = 6e-15
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 27 agctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcacactcc 86
|||||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 66 agctatttagtgtgataatggcgtttgaaagaaaggaaacaaacaccattgtcacactcc 7
Query: 87 acagct 92
| ||||
Sbjct: 6 atagct 1
>34270_dre-mir-122:mirbase
Length = 76
Score = 67.9 bits (34), Expect = 2e-12
Identities = 63/71 (88%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 28 gctatttagtgtgataatggcgtttgat---agtttagacacaaacaccattgtcacact 84
||||||||||||||||||||||||||| || | || ||||||||||||||||||||
Sbjct: 71 gctatttagtgtgataatggcgtttgacgacagat--gatacaaacaccattgtcacact 14
Query: 85 ccacagctctg 95
|||||||||||
Sbjct: 13 ccacagctctg 3
