miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>25993_gga-mir-202:mirbase
          Length = 89

 Score =  121 bits (61), Expect = 1e-28
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                      
Query: 7  gctcattgttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcata 66
          |||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 1  gctcgttgttcctttttcctatgcatatacttctttgagagtttgatctaaagaggcata 60

                                       
Query: 67 cggcatgggaaaatggggcaattgaggta 95
            ||||||||||||||||| | |||||||
Sbjct: 61 gagcatgggaaaatggggcgactgaggta 89




>28521_hsa-mir-202:mirbase
          Length = 110

 Score = 95.6 bits (48), Expect = 6e-21
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                      
Query: 14 gttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcatg 73
          |||||||||||||||||||||||||||||||| |||||  ||||||||| ||| ||||||
Sbjct: 20 gttcctttttcctatgcatatacttctttgaggatctggcctaaagaggtatagggcatg 79

                      
Query: 74 ggaaaatggggc 85
          |||||| |||||
Sbjct: 80 ggaaaacggggc 91




>30280_ptr-mir-202:mirbase
          Length = 109

 Score = 95.6 bits (48), Expect = 6e-21
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                      
Query: 14 gttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcatg 73
          |||||||||||||||||||||||||||||||| |||||  ||||||||| ||| ||||||
Sbjct: 20 gttcctttttcctatgcatatacttctttgaggatctggcctaaagaggtatagggcatg 79

                      
Query: 74 ggaaaatggggc 85
          |||||| |||||
Sbjct: 80 ggaaaacggggc 91




>26500_tgu-mir-202-1:mirbase
          Length = 70

 Score = 91.7 bits (46), Expect = 9e-20
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                      
Query: 18 ctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcatgggaa 77
          |||||||||||||||||||||||||||||||    |||||||||| ||| ||||||||||
Sbjct: 1  ctttttcctatgcatatacttctttgagaattgcttctaaagaggtatagggcatgggaa 60

                    
Query: 78 aatggggcaa 87
          ||||||||||
Sbjct: 61 aatggggcaa 70




>26501_tgu-mir-202-2:mirbase
          Length = 70

 Score = 91.7 bits (46), Expect = 9e-20
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                      
Query: 18 ctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcatgggaa 77
          |||||||||||||||||||||||||||||||    |||||||||| ||| ||||||||||
Sbjct: 1  ctttttcctatgcatatacttctttgagaattgcttctaaagaggtatagggcatgggaa 60

                    
Query: 78 aatggggcaa 87
          ||||||||||
Sbjct: 61 aatggggcaa 70




>32792_rno-mir-202:mirbase
          Length = 72

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                      
Query: 14 gttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcatg 73
          |||||||||||||||||||||||||||||| | ||||| |||||||||| |||  |||||
Sbjct: 1  gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 60

                   
Query: 74 ggaaaatgg 82
          |||||||||
Sbjct: 61 ggaaaatgg 69




>33281_bta-mir-202:mirbase
          Length = 99

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcat 72
          |||||||||||||||||||||||||||||||||  ||||  |||||||||  || |||||
Sbjct: 10 tgttcctttttcctatgcatatacttctttgagggtctggcctaaagaggtgtagggcat 69

                       
Query: 73 gggaaaatggggc 85
          |||||||||||||
Sbjct: 70 gggaaaatggggc 82




>34358_dre-mir-202:mirbase
          Length = 76

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcat 72
          |||||||||||||||||||||||| ||||||| |  ||| | |||||||||||| |||||
Sbjct: 2  tgttcctttttcctatgcatatacctctttgacatgctgctttaaagaggcatagggcat 61

                       
Query: 73 gggaaaatggggc 85
          |||||||||||||
Sbjct: 62 gggaaaatggggc 74




>31927_mmu-mir-202:mirbase
          Length = 72

 Score = 81.8 bits (41), Expect = 8e-17
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                      
Query: 14 gttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcatg 73
          |||||||||||||||||||||||||||||| | ||||| |||||||||| |||  |||||
Sbjct: 1  gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 60

                   
Query: 74 ggaaaatgg 82
          |||| ||||
Sbjct: 61 ggaagatgg 69




>31928_mmu-mir-202:mirbase
          Length = 72

 Score = 81.8 bits (41), Expect = 8e-17
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                      
Query: 14 gttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcatg 73
          |||||||||||||||||||||||||||||| | ||||| |||||||||| |||  |||||
Sbjct: 1  gttcctttttcctatgcatatacttctttgtggatctggtctaaagaggtatagcgcatg 60

                   
Query: 74 ggaaaatgg 82
          |||| ||||
Sbjct: 61 ggaagatgg 69




>26762_cfa-mir-202:mirbase
          Length = 71

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                      
Query: 14 gttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcatg 73
          ||||||||||||||||||||||||||||||||  ||||  || ||||||  || ||||||
Sbjct: 1  gttcctttttcctatgcatatacttctttgagggtctggcctgaagaggtgtaaggcatg 60

                     
Query: 74 ggaaaatgggg 84
          |||||| ||||
Sbjct: 61 ggaaaaggggg 71




>25822_xtr-mir-202-1:mirbase
          Length = 87

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcat 72
          |||||||||||||||||||||||| ||||||| ||    || ||||| |||||| |||||
Sbjct: 6  tgttcctttttcctatgcatatacctctttgaaaaatgaatgtaaaggggcatagggcat 65

                    
Query: 73 gggaaaatgg 82
          ||||||||||
Sbjct: 66 gggaaaatgg 75




>25823_xtr-mir-202-2:mirbase
          Length = 87

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                      
Query: 13 tgttcctttttcctatgcatatacttctttgagaatctgatctaaagaggcatacggcat 72
          |||||||||||||||||||||||| ||||||| ||    || ||||| |||||| |||||
Sbjct: 6  tgttcctttttcctatgcatatacctctttgaaaaataaatgtaaaggggcatagggcat 65

                    
Query: 73 gggaaaatgg 82
          ||||||||||
Sbjct: 66 gggaaaatgg 75




>34630_fru-mir-202:mirbase
          Length = 69

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 55 taaagaggcatacggcatgggaaaatgggg 84
          |||||||||||| |||||||||||||||||
Sbjct: 40 taaagaggcatagggcatgggaaaatgggg 69




>34777_tni-mir-202:mirbase
          Length = 69

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 55 taaagaggcatacggcatgggaaaatgggg 84
          |||||||||||| |||||||||||||||||
Sbjct: 40 taaagaggcatagggcatgggaaaatgggg 69




>34033_ssc-mir-202:mirbase
          Length = 80

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 22 ttcctatgcatatacttctttgag 45
          ||||||||||||||||||||||||
Sbjct: 13 ttcctatgcatatacttctttgag 36