miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25997_gga-mir-205a:mirbase
Length = 96
Score = 133 bits (67), Expect = 3e-32
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 6 tccatgagttctattgtccttcattccaccggagtctgtctcatatctaatcagatttca 65
|||||| ||||| ||||||||||||||||||||||||||||| || |||| |||||||||
Sbjct: 6 tccatgggttctgttgtccttcattccaccggagtctgtctcgtacctaaccagatttca 65
Query: 66 gtggagtgaagcacaagagacatggag 92
|||||||||||||||||||||||||||
Sbjct: 66 gtggagtgaagcacaagagacatggag 92
>31531_oan-mir-205:mirbase
Length = 108
Score = 129 bits (65), Expect = 4e-31
Identities = 80/85 (94%)
Strand = Plus / Plus
Query: 14 ttctattgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtg 73
|||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 23 ttctgttgtccttcattccaccggagtctgtttcgtacctaatcagatttcagtggagtg 82
Query: 74 aagcacaagagacatggagttgaat 98
||||||||||| |||||||||||||
Sbjct: 83 aagcacaagaggcatggagttgaat 107
>27423_mdo-mir-205a:mirbase
Length = 72
Score = 125 bits (63), Expect = 6e-30
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaagca 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaagca 61
Query: 79 caagagacatg 89
||||| ||||
Sbjct: 62 taagaggcatg 72
>25827_xtr-mir-205a:mirbase
Length = 86
Score = 115 bits (58), Expect = 6e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaagcac 79
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtggagtgaagcac 73
Query: 80 aagagacatg 89
||||| ||||
Sbjct: 74 aagaggcatg 83
>25668_xla-mir-205:mirbase
Length = 86
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaagcac 79
||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
Query: 80 aagagacatg 89
||||| ||||
Sbjct: 74 aagaggcatg 83
>27518_age-mir-205:mirbase
Length = 109
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 14 ttctattgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtg 73
|||| |||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>27583_lla-mir-205:mirbase
Length = 110
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 14 ttctattgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtg 73
|||| |||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>27802_mml-mir-205:mirbase
Length = 110
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 14 ttctattgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtg 73
|||| |||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>28233_mne-mir-205:mirbase
Length = 110
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 14 ttctattgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtg 73
|||| |||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>28329_ggo-mir-205:mirbase
Length = 110
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 14 ttctattgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtg 73
|||| |||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>28524_hsa-mir-205:mirbase
Length = 110
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 14 ttctattgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtg 73
|||| |||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>30117_ppa-mir-205:mirbase
Length = 110
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 14 ttctattgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtg 73
|||| |||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>30283_ptr-mir-205:mirbase
Length = 110
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 14 ttctattgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtg 73
|||| |||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>30901_ppy-mir-205:mirbase
Length = 109
Score = 93.7 bits (47), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 14 ttctattgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtg 73
|||| |||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>34035_ssc-mir-205:mirbase
Length = 69
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaagc 77
|||||||||||||||||||||||||||||||| | || |||||||||||||||||||||
Sbjct: 4 ttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagc 62
>27091_eca-mir-205:mirbase
Length = 69
Score = 91.7 bits (46), Expect = 9e-20
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaag 76
|||||||||||||||||||||||||||||||| | || ||||||||||||||||||||
Sbjct: 4 ttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaag 61
>26765_cfa-mir-205:mirbase
Length = 69
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaag 76
||||||||||||||||||||||||||||| || | || ||||||||||||||||||||
Sbjct: 4 ttgtccttcattccaccggagtctgtctcgtacccaaccagatttcagtggagtgaag 61
>33283_bta-mir-205:mirbase
Length = 69
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaag 76
||||||||||||||||||||||||||||| || | || ||||||||||||||||||||
Sbjct: 4 ttgtccttcattccaccggagtctgtctcgtacccaaccagatttcagtggagtgaag 61
>32795_rno-mir-205:mirbase
Length = 108
Score = 73.8 bits (37), Expect = 2e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaagcac 79
||||||||||||||||||||||||||| || | || ||||||||||||||||||||| |
Sbjct: 31 tgtccttcattccaccggagtctgtcttat-gccaaccagatttcagtggagtgaagctc 89
Query: 80 aagagacatggag 92
| ||| |||||||
Sbjct: 90 aggaggcatggag 102
>31931_mmu-mir-205:mirbase
Length = 68
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaagc 77
|||||||||||||||||||||||||||| || | || |||||||||||||||||||||
Sbjct: 4 ttgtccttcattccaccggagtctgtcttat-gccaaccagatttcagtggagtgaagc 61
>34633_fru-mir-205:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 8e-08
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 22 tccttcattccaccggagtctgtct-catatctaatcagatttcagtggagtgaagcaca 80
||||||||||||||||||||||| | ||| ||| ||||||||||||| |||||| |
Sbjct: 10 tccttcattccaccggagtctgtatgtgtatttaaccagatttcagtggtgtgaagtgta 69
Query: 81 agagacatgg 90
||||||||||
Sbjct: 70 agagacatgg 79
>25523_pma-mir-205a:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 gtccttcattccaccggagtctgtc 45
|||||||||||||||||||||||||
Sbjct: 9 gtccttcattccaccggagtctgtc 33
>34363_dre-mir-205:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tccttcattccaccggagtctgt 44
|||||||||||||||||||||||
Sbjct: 19 tccttcattccaccggagtctgt 41
>34781_tni-mir-205:mirbase
Length = 66
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tccttcattccaccggagtctgt 44
|||||||||||||||||||||||
Sbjct: 3 tccttcattccaccggagtctgt 25
>25524_pma-mir-205b:mirbase
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 ccttcattccaccggagtctgt 44
||||||||||||||||||||||
Sbjct: 8 ccttcattccaccggagtctgt 29
