miRNEST 2.0, an integrative microRNA resource :: BLAST
>25937_gga-mir-122-1:mirbase
Length = 77
Score = 117 bits (59), Expect = 2e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 3 gagctgtggagtgtgacaatggtgtttgtgtccaatctatcaaacgccattatcacacta 62
Query: 76 aatagctactg 86
|||||||||||
Sbjct: 63 aatagctactg 73
>25938_gga-mir-122-2:mirbase
Length = 77
Score = 109 bits (55), Expect = 4e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 3 gagctatggagtgtgacaatggtgtttgtgtccaatctatcaaacgccattatcacacta 62
Query: 76 aatagctactg 86
|||||||||||
Sbjct: 63 aatagctactg 73
>28426_hsa-mir-122:mirbase
Length = 85
Score = 109 bits (55), Expect = 4e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| || || | |||||||||||||||||||||
Sbjct: 9 gagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacacta 68
Query: 76 aatagctactgctag 90
|||||||||||||||
Sbjct: 69 aatagctactgctag 83
>30814_ppy-mir-122:mirbase
Length = 85
Score = 109 bits (55), Expect = 4e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| || || | |||||||||||||||||||||
Sbjct: 9 gagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacacta 68
Query: 76 aatagctactgctag 90
|||||||||||||||
Sbjct: 69 aatagctactgctag 83
>31478_oan-mir-122:mirbase
Length = 111
Score = 109 bits (55), Expect = 4e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||
Sbjct: 23 gagctgtggagtgtgacaatggtgtttgtgtccagtctatcaaacgccattatcacacta 82
Query: 76 aatagctactg 86
|||||||||||
Sbjct: 83 aatagctactg 93
>33197_bta-mir-122:mirbase
Length = 85
Score = 109 bits (55), Expect = 4e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 9 gagctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacacta 68
Query: 76 aatagctactg 86
|||||||||||
Sbjct: 69 aatagctactg 79
>33967_ssc-mir-122:mirbase
Length = 85
Score = 109 bits (55), Expect = 4e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 9 gagctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacacta 68
Query: 76 aatagctactg 86
|||||||||||
Sbjct: 69 aatagctactg 79
>31837_mmu-mir-122:mirbase
Length = 66
Score = 107 bits (54), Expect = 1e-24
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 17 agctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacactaa 76
|||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtccaaaccatcaaacgccattatcacactaa 60
Query: 77 atagct 82
||||||
Sbjct: 61 atagct 66
>27371_mdo-mir-122:mirbase
Length = 74
Score = 101 bits (51), Expect = 9e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||| ||||||||||||||||||||||| |||| || |||||||||||||||||||||
Sbjct: 3 gagctatggagtgtgacaatggtgtttgtgtccagtctatcaaacgccattatcacacta 62
Query: 76 aatagctactg 86
|||||||||||
Sbjct: 63 aatagctactg 73
>27714_mml-mir-122a:mirbase
Length = 85
Score = 101 bits (51), Expect = 9e-23
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| || || | |||||||||||||||||||||
Sbjct: 9 gagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacacta 68
Query: 76 aatagctactgctag 90
|||||||||| ||||
Sbjct: 69 aatagctactactag 83
>29379_hsa-mir-3591:mirbase
Length = 73
Score = 101 bits (51), Expect = 9e-23
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| || || | |||||||||||||||||||||
Sbjct: 71 gagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacacta 12
Query: 76 aatagctactg 86
|||||||||||
Sbjct: 11 aatagctactg 1
>29380_hsa-mir-3591:mirbase
Length = 73
Score = 101 bits (51), Expect = 9e-23
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| || || | |||||||||||||||||||||
Sbjct: 71 gagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacacta 12
Query: 76 aatagctactg 86
|||||||||||
Sbjct: 11 aatagctactg 1
>30207_ptr-mir-122:mirbase
Length = 84
Score = 101 bits (51), Expect = 9e-23
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| || || |||||||||||||||||||||
Sbjct: 8 gagctgtggagtgtgacaatggtgtttgtgtctaaattatcaaacgccattatcacacta 67
Query: 76 aatagctactgctag 90
|||||||||||||||
Sbjct: 68 aatagctactgctag 82
>27006_eca-mir-122:mirbase
Length = 66
Score = 99.6 bits (50), Expect = 4e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 17 agctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacactaa 76
|||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
Query: 77 atagct 82
||||||
Sbjct: 61 atagct 66
>32716_rno-mir-122:mirbase
Length = 85
Score = 93.7 bits (47), Expect = 2e-20
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||| ||||||||||||||||||||||| ||||| | ||||||||||| |||||||||
Sbjct: 9 gagctctggagtgtgacaatggtgtttgtgtccaaaacatcaaacgccatcatcacacta 68
Query: 76 aatagctactgctag 90
|| ||||||||||||
Sbjct: 69 aacagctactgctag 83
>33091_rno-mir-3591:mirbase
Length = 109
Score = 93.7 bits (47), Expect = 2e-20
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||| ||||||||||||||||||||||| ||||| | ||||||||||| |||||||||
Sbjct: 88 gagctctggagtgtgacaatggtgtttgtgtccaaaacatcaaacgccatcatcacacta 29
Query: 76 aatagctactgctag 90
|| ||||||||||||
Sbjct: 28 aacagctactgctag 14
>34731_tni-mir-122:mirbase
Length = 66
Score = 91.7 bits (46), Expect = 9e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 17 agctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacactaa 76
|||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtcctttctttcaaacgccattatcacactaa 60
Query: 77 atagct 82
||||||
Sbjct: 61 atagct 66
>26449_tgu-mir-122:mirbase
Length = 72
Score = 89.7 bits (45), Expect = 3e-19
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 5 gagctgtggagtgtgacaatggtgtttgtgtcc-atctatcaaacgccattatcacacta 63
Query: 76 aatag 80
|||||
Sbjct: 64 aatag 68
>34270_dre-mir-122:mirbase
Length = 76
Score = 87.7 bits (44), Expect = 1e-18
Identities = 64/69 (92%), Gaps = 5/69 (7%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatc---cgtcaaacgccattatcaca 72
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 5 gagctgtggagtgtgacaatggtgtttgtatc--atctgtcgtcaaacgccattatcaca 62
Query: 73 ctaaatagc 81
|||||||||
Sbjct: 63 ctaaatagc 71
>26685_cfa-mir-122:mirbase
Length = 58
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 22 tggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacactaaata 79
||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||
Sbjct: 1 tggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaaata 58
>34584_fru-mir-122:mirbase
Length = 66
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 17 agctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacactaa 76
|||| ||||||||||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 1 agctatggagtgtgacaatggtgtttgtttcctttctttcaaacgccattatcacactaa 60
Query: 77 atagct 82
||||||
Sbjct: 61 atagct 66
>25762_xtr-mir-122:mirbase
Length = 69
Score = 65.9 bits (33), Expect = 5e-12
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 16 gagctgtggagtgtgacaatggtgtttgtatccaatccgtcaaacgccattatcacacta 75
||||| ||||||||||||||||||||||| || | | |||||||||||||||||||||
Sbjct: 1 gagctatggagtgtgacaatggtgtttgtgtcagagctatcaaacgccattatcacacta 60
Query: 76 a 76
|
Sbjct: 61 a 61