miRNEST 2.0, an integrative microRNA resource :: BLAST
>28805_hsa-mir-548ae-2:mirbase
Length = 67
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 30 aaaagtaatggcaaaaatagcaattactttcacacc 65
||||||||||||||||| |||||||||||||||||
Sbjct: 32 aaaagtaatggcaaaaactgcaattactttcacacc 67
>28818_hsa-mir-548c:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 7e-08
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 31 aaagtaatggcaaaaatagcaattactttcacaccaacctaa 72
|||||||||||||||| ||||||||||| |||||||||||
Sbjct: 54 aaagtaatggcaaaaaccgcaattacttttgcaccaacctaa 13
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 10 ctattaggttggtgcaaaagtaat 33
>28819_hsa-mir-548c:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 7e-08
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 31 aaagtaatggcaaaaatagcaattactttcacaccaacctaa 72
|||||||||||||||| ||||||||||| |||||||||||
Sbjct: 54 aaagtaatggcaaaaaccgcaattacttttgcaccaacctaa 13
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 10 ctattaggttggtgcaaaagtaat 33
>28836_hsa-mir-548i-1:mirbase
Length = 149
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 30 aaaagtaatggcaaaaatagcaatta 55
||||||||||||||||||||||||||
Sbjct: 64 aaaagtaatggcaaaaatagcaatta 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 24 ctattaggttggtgcaaaagtaat 47
>28837_hsa-mir-548i-2:mirbase
Length = 149
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 30 aaaagtaatggcaaaaatagcaatta 55
||||||||||||||||||||||||||
Sbjct: 64 aaaagtaatggcaaaaatagcaatta 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 24 ctattagtttggtgcaaaagtaat 47
>28838_hsa-mir-548i-3:mirbase
Length = 149
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 30 aaaagtaatggcaaaaatagcaatta 55
||||||||||||||||||||||||||
Sbjct: 64 aaaagtaatggcaaaaatagcaatta 89
>28857_hsa-mir-548z:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 7e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 31 aaagtaatggcaaaaatagcaattactttcacaccaacctaa 72
|||||||||||||||| ||||||||||| |||||||||||
Sbjct: 44 aaagtaatggcaaaaaccgcaattacttttgcaccaacctaa 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 88 ctattaggttggtgcaaaagtaat 65
>30473_ptr-mir-548c:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 7e-08
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 31 aaagtaatggcaaaaatagcaattactttcacaccaacctaa 72
|||||||||||||||| ||||||||||| |||||||||||
Sbjct: 54 aaagtaatggcaaaaaccgcaattacttttgcaccaacctaa 13
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 10 ctattaggttggtgcaaaagtaat 33
>28019_mml-mir-570:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 30 aaaagtaatggcaaaaatagcaattactttcacaccaacctaa 72
||||||||||||||||| |||||||| || |||||||||||
Sbjct: 45 aaaagtaatggcaaaaactgcaattacgtttgcaccaacctaa 3
>28796_hsa-mir-548a-2:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 30 aaaagtaatggcaaaaatagcaattactttcacaccaacctaa 72
|||||||||||||||| | ||||||||||| |||||| ||||
Sbjct: 50 aaaagtaatggcaaaactggcaattacttttgcaccaaactaa 92
>28804_hsa-mir-548ae-1:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 35 taatggcaaaaatagcaattactttcacacc 65
|||||||||||| |||||||||||||||||
Sbjct: 37 taatggcaaaaactgcaattactttcacacc 67
>28811_hsa-mir-548aj-2:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 30 aaaagtaatggcaaaaatagcaattactttcacaccaacctaa 72
||||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 49 aaaagtaatagcaaaaactgcaattacttttgcaccaacctaa 7
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 35 taatggcaaaaatagcaattactttcacaccaacctaa 72
|||||| ||||| ||||||||||| ||||||||||||
Sbjct: 49 taatggtaaaaactgcaattacttttacaccaacctaa 86
>28815_hsa-mir-548an:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 30 aaaagtaatggcaaaaatagcaattactttcacaccaacctaa 72
||||||||||||||||| |||||| |||| |||||||||||
Sbjct: 40 aaaagtaatggcaaaaaccgcaattccttttgcaccaacctaa 82
>28833_hsa-mir-548h-3:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 31 aaagtaatggcaaaaatagcaattactttcacaccaacctaa 72
|||||||| ||||||| ||||||||||| |||||||||||
Sbjct: 55 aaagtaatagcaaaaactgcaattacttttgcaccaacctaa 96
>30477_ptr-mir-548i-1:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 34 gtaatggcaaaaatagcaatta 55
||||||||||||||||||||||
Sbjct: 68 gtaatggcaaaaatagcaatta 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 24 ctattaggttggtgcaaaagtaat 47
>30479_ptr-mir-548i-3:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 aaaagtaatggcaaaaatagcaatta 55
||||||||||||||||| ||||||||
Sbjct: 63 aaaagtaatggcaaaaacagcaatta 88
>30480_ptr-mir-548i-4:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 aaaagtaatggcaaaaatagcaatta 55
||||||||||||||||||| ||||||
Sbjct: 64 aaaagtaatggcaaaaataacaatta 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 24 ctattaggttggtgcaaaagtaat 47
>28001_mml-mir-548e:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 31 aaagtaatggcaaaaatagcaattactttcacaccaaccta 71
|||||||||| |||| | ||||||||||| ||||||||||
Sbjct: 54 aaagtaatggtaaaactcgcaattacttttgcaccaaccta 14
>28813_hsa-mir-548al:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 35 taatggcaaaaatagcaattacttt 59
|||||||||||| ||||||||||||
Sbjct: 35 taatggcaaaaacagcaattacttt 11
>28856_hsa-mir-548y:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 14 actattagattggtgcaaaagtaat 38
|||||||| ||||||||||||||||
Sbjct: 7 actattaggttggtgcaaaagtaat 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 33 agtaatggcaaaaatagcaattactttcacaccaacctaa 72
|||||||||||||| || |||||||| |||||||||||
Sbjct: 50 agtaatggcaaaaacagtgattacttttgcaccaacctaa 11
>30481_ptr-mir-548i-5:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 30 aaaagtaatggcaaaaatagcaatt 54
||||||||||||||||| |||||||
Sbjct: 63 aaaagtaatggcaaaaacagcaatt 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 23 ctattaggttggtgcaaaagtaat 46
>30482_ptr-mir-548i-6:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 30 aaaagtaatggcaaaaatagcaatt 54
||||||||||||||||| |||||||
Sbjct: 63 aaaagtaatggcaaaaacagcaatt 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 23 ctattaggttggtgcaaaagtaat 46
>28803_hsa-mir-548ad:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 16 tattagattggtgcaaaagt 35
||||||||||||||||||||
Sbjct: 81 tattagattggtgcaaaagt 62
>28834_hsa-mir-548h-4:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 2 ctattaggttggtgcaaaagtaat 25
>30474_ptr-mir-548f-1:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 81 ctattaggttggtgcaaaagtaat 58
>30478_ptr-mir-548i-2:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ctattagattggtgcaaaagtaat 38
||||||| ||||||||||||||||
Sbjct: 24 ctattaggttggtgcaaaagtaat 47
