miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>28948_hsa-mir-631:mirbase
Length = 75
Score = 149 bits (75), Expect = 5e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 16 gtggggagcctggttagacctggcccagacctcagctacacaagctgatggactgagtca 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggggagcctggttagacctggcccagacctcagctacacaagctgatggactgagtca 60
Query: 76 ggggccacactctcc 90
|||||||||||||||
Sbjct: 61 ggggccacactctcc 75
>31207_ppy-mir-631:mirbase
Length = 75
Score = 149 bits (75), Expect = 5e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 16 gtggggagcctggttagacctggcccagacctcagctacacaagctgatggactgagtca 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggggagcctggttagacctggcccagacctcagctacacaagctgatggactgagtca 60
Query: 76 ggggccacactctcc 90
|||||||||||||||
Sbjct: 61 ggggccacactctcc 75
>28066_mml-mir-631:mirbase
Length = 75
Score = 141 bits (71), Expect = 1e-34
Identities = 74/75 (98%)
Strand = Plus / Plus
Query: 16 gtggggagcctggttagacctggcccagacctcagctacacaagctgatggactgagtca 75
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagagcctggttagacctggcccagacctcagctacacaagctgatggactgagtca 60
Query: 76 ggggccacactctcc 90
|||||||||||||||
Sbjct: 61 ggggccacactctcc 75
>30558_ptr-mir-631:mirbase
Length = 75
Score = 133 bits (67), Expect = 3e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 16 gtggggagcctggttagacctggcccagacctcagctacacaagctgatggactgagtca 75
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggggagcctggttagacctggccgagacctcagctacacaagctgatggactgagtca 60
Query: 76 ggggccacactctcc 90
|| ||||||||||||
Sbjct: 61 ggcgccacactctcc 75
>33436_bta-mir-631:mirbase
Length = 75
Score = 75.8 bits (38), Expect = 6e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 18 ggggagcctggttagacctggcccagacctcagctacacaagctgatggactgagtcagg 77
|||||||| |||||||||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 1 ggggagcccagttagacctggcttagacctcagcttcacaagctgatagactgagtcagg 60
Query: 78 gg 79
||
Sbjct: 61 gg 62
>26892_cfa-mir-631:mirbase
Length = 68
Score = 54.0 bits (27), Expect = 2e-08
Identities = 46/51 (90%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 32 gacctggcccagacctcagctacacaagctgatggactgagtcaggggcca 82
|||||||||||||||||||| || | |||||||| |||||||||||||||
Sbjct: 3 gacctggcccagacctcagccccata-gctgatgggctgagtcaggggcca 52
