miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41074_ghr-MIR2950:mirbase
          Length = 108

 Score =  190 bits (96), Expect = 1e-49
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtttatgttatattccatctcttgcacactggactagccagctttttgttggcttcagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   gtttatgttatattccatctcttgcacactggactagccagctttttgttggcttcagct 65

                                               
Query: 61  tcaggttggtgtgcagggggtggaatacatcattga 96
           ||||||||||||||||||||||||||||||||||||
Sbjct: 66  tcaggttggtgtgcagggggtggaatacatcattga 101




>41699_vvi-MIR2950:mirbase
          Length = 107

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tattccatctcttgcacactggac 34
          ||||||||||||||||||||||||
Sbjct: 23 tattccatctcttgcacactggac 46



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 56 cagcttcaggttggtgtgcagggggtggaatacatcat 93
          ||||| ||| |||||||||| ||| |||||||||||||
Sbjct: 55 cagctgcagtttggtgtgcacgggatggaatacatcat 92