miRNEST 2.0, an integrative microRNA resource :: BLAST
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 192 bits (97), Expect = 4e-50
Identities = 97/97 (100%)
Strand = Plus / Minus
Query: 1 gttaaggcgctggatgcagaggtttatcgatcgattcatgtatttgtgttattctcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gttaaggcgctggatgcagaggtttatcgatcgattcatgtatttgtgttattctcacaa 64
Query: 61 caaaattctcaggaagagatcgatgaaccgctgcctc 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 63 caaaattctcaggaagagatcgatgaaccgctgcctc 27
>41090_tcc-MIR162:mirbase
Length = 131
Score = 165 bits (83), Expect = 8e-42
Identities = 92/95 (96%)
Strand = Plus / Minus
Query: 3 taaggcgctggatgcagaggtttatcgatcgattcatgtatttgtgttattctcacaaca 62
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 118 taaggctctggatgcagaggtttatcgatcgaatcatgtatttgtgttattctcacaaca 59
Query: 63 aaattctcaggaagagatcgatgaaccgctgcctc 97
|||||| ||||||||||||||||||||||||||||
Sbjct: 58 aaattcccaggaagagatcgatgaaccgctgcctc 24
>41220_csi-MIR162:mirbase
Length = 201
Score = 105 bits (53), Expect = 7e-24
Identities = 85/93 (91%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 7 gcgctggatgcagaggtttatcgatcgattcatgta-tttgtgtta-ttctcacaacaaa 64
|||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||
Sbjct: 184 gcgctggatgcagaggtttatcgatcgattcatgtattttgtgttatttttcacaacaaa 125
Query: 65 attctcaggaagagatcgatgaaccgctgcctc 97
||| || ||| ||||||||||||||||||||
Sbjct: 124 atttgcacaaagtgatcgatgaaccgctgcctc 92
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 91.7 bits (46), Expect = 1e-19
Identities = 82/90 (91%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 8 cgctggatgcagaggtttatcgatcgattcatgtatttgtgttattctcacaacaaaatt 67
|||||||||||||||||||||||||||||||||| | |||| | || |||| || |||||
Sbjct: 102 cgctggatgcagaggtttatcgatcgattcatgt-tctgtgat-ttttcac-accaaatt 46
Query: 68 ctcaggaagagatcgatgaaccgctgcctc 97
| ||||||||||||||||||||||||||||
Sbjct: 45 cccaggaagagatcgatgaaccgctgcctc 16
>40342_rco-MIR162:mirbase
Length = 101
Score = 81.8 bits (41), Expect = 9e-17
Identities = 82/93 (88%), Gaps = 2/93 (2%)
Strand = Plus / Minus
Query: 7 gcgctggatgcagaggtttatcgatcgattcatg-tatttgtgttattctcacaacaaaa 65
|||||||||||||||||||||||||||||||||| ||| | || | |||||||||||
Sbjct: 99 gcgctggatgcagaggtttatcgatcgattcatgcgttttatttttgtttcacaacaaaa 40
Query: 66 t-tctcaggaagagatcgatgaaccgctgcctc 97
| | ||||||||||||||||||||||||||||
Sbjct: 39 tcttccaggaagagatcgatgaaccgctgcctc 7
>40437_gma-MIR162:mirbase
Length = 102
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 7 gcgctggatgcagaggtttatcgatcgattcatg 40
||||||||||||||||||||||||||||||||||
Sbjct: 96 gcgctggatgcagaggtttatcgatcgattcatg 63
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 69 tcaggaagagatcgatgaaccgctgc 94
||||||||||||||||||||||||||
Sbjct: 41 tcaggaagagatcgatgaaccgctgc 16
>39813_aly-MIR162b:mirbase
Length = 184
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 7 gcgctggatgcagaggtttatcgatcgattcatg 40
||||||||||||||||||||||||||||||||||
Sbjct: 136 gcgctggatgcagaggtttatcgatcgattcatg 103
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 7 gcgctggatgcagaggtttatcgatcgattcatgt 41
||||||||||||||||||||||||||| |||||||
Sbjct: 101 gcgctggatgcagaggtttatcgatcggttcatgt 67
>40663_mtr-MIR162:mirbase
Length = 124
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 7 gcgctggatgcagaggtttatcgatcgattcatgt 41
|||||||||||||||||||||||| ||||||||||
Sbjct: 110 gcgctggatgcagaggtttatcgaccgattcatgt 76
>40025_ath-MIR162b:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 7 gcgctggatgcagaggtttatcgatcgattc 37
|||||||||||||||||||||||||||||||
Sbjct: 102 gcgctggatgcagaggtttatcgatcgattc 72
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 65 attctcaggaagagatcgatgaaccgctgcctc 97
|||| |||||| ||||||||||||||||||||
Sbjct: 47 attcacaggaattgatcgatgaaccgctgcctc 15
>40024_ath-MIR162a:mirbase
Length = 140
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 8 cgctggatgcagaggtttatcgatcgattcatg 40
||||||||||||||||||||||||| |||||||
Sbjct: 111 cgctggatgcagaggtttatcgatctattcatg 79
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 70 caggaagagatcgatgaaccgctgcctc 97
||||||||||||||||||||||||||||
Sbjct: 55 caggaagagatcgatgaaccgctgcctc 28
>39812_aly-MIR162a:mirbase
Length = 228
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 8 cgctggatgcagaggtttatcgatcgattcatg 40
||||||||||||||||||||||||| |||||||
Sbjct: 158 cgctggatgcagaggtttatcgatctattcatg 126
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 70 caggaagagatcgatgaaccgctgcctc 97
||||||||||||||||||||||||||||
Sbjct: 98 caggaagagatcgatgaaccgctgcctc 71
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 10 ctggatgcagaggtttatcgatcgattc 37
||||||||||||||||||||||||||||
Sbjct: 127 ctggatgcagaggtttatcgatcgattc 100
>41929_osa-MIR162a:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 10 ctggatgcagaggtttatcgatcgattc 37
||||||||||||||||||||||||||||
Sbjct: 163 ctggatgcagaggtttatcgatcgattc 136
>41578_vvi-MIR162:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 73/87 (83%), Gaps = 6/87 (6%)
Strand = Plus / Minus
Query: 8 cgctggatgcagaggtttatcgatcgattcatgtatttgtgttattctcacaacaaaatt 67
||||||||||||||||||||||| |||||| || | || | || ||||||||| |
Sbjct: 95 cgctggatgcagaggtttatcgaccgattcttga---tctgcttttttcacaacaa---t 42
Query: 68 ctcaggaagagatcgatgaaccgctgc 94
||||||||||||||||||||||||||
Sbjct: 41 ttcaggaagagatcgatgaaccgctgc 15
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 12 ggatgcagaggtttatcgatcgattc 37
||||||||||||||||||||||||||
Sbjct: 129 ggatgcagaggtttatcgatcgattc 104
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 69 tcaggaagagatcgatgaaccgctgcctc 97
||||||| |||||||||||||||||||||
Sbjct: 42 tcaggaaaagatcgatgaaccgctgcctc 14
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 ctggatgcagaggtttatcgatcg 33
||||||||||||||||||||||||
Sbjct: 98 ctggatgcagaggtttatcgatcg 75
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 69 tcaggaagagatcgatgaaccgctgcctc 97
||||||| |||||||||||||||||||||
Sbjct: 42 tcaggaaaagatcgatgaaccgctgcctc 14
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 ctggatgcagaggtttatcgatcg 33
||||||||||||||||||||||||
Sbjct: 98 ctggatgcagaggtttatcgatcg 75
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 ctggatgcagaggtttatcgatcgattc 37
||||||||||||||||||||| ||||||
Sbjct: 130 ctggatgcagaggtttatcgaccgattc 103
>41930_osa-MIR162b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 ctggatgcagaggtttatcgatcgattc 37
||||||||||||| ||||||||||||||
Sbjct: 124 ctggatgcagaggcttatcgatcgattc 97
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 10 ctggatgcagaggtttatcgatcgattc 37
||||||||||||||||||||| ||||||
Sbjct: 99 ctggatgcagaggtttatcgaccgattc 72
