miRNEST 2.0, an integrative microRNA resource :: BLAST
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 216 bits (109), Expect = 3e-57
Identities = 121/125 (96%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcacaagtattgagactcagtgcgtggtggtgatggtgacttat 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11 ggagcatcatcaagattcacaagtattgagactcagtgcgtggtggtgatggtgactttt 70
Query: 64 gtggtcccttcctacactccgatggctctttgatatgggaatcttgatgatgctgccgtg 123
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |
Sbjct: 71 gtggtcccttcctacactccgatggctctttgatgtgggaatcttgatgatgctgcagcg 130
Query: 124 gcaat 128
|||||
Sbjct: 131 gcaat 135
>40461_gma-MIR172d:mirbase
Length = 150
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 91 ctttgatatgggaatcttgatgatgctgc 119
|||||||||||||||||||||||||||||
Sbjct: 101 ctttgatatgggaatcttgatgatgctgc 129
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcacaag 26
|||||||||||||||||||||||
Sbjct: 23 ggagcatcatcaagattcacaag 45
>40366_rco-MIR172:mirbase
Length = 144
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 91 ctttgatatgggaatcttgatgatgctgc 119
|||||||||||||||||||||||||||||
Sbjct: 109 ctttgatatgggaatcttgatgatgctgc 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcacaa 25
||||||||||||||||||||||
Sbjct: 6 ggagcatcatcaagattcacaa 27
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 97 tatgggaatcttgatgatgctgccgtggcaat 128
||||||||||||||||||||||| | ||||||
Sbjct: 111 tatgggaatcttgatgatgctgcagcggcaat 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcacaa 25
||||||||||||||||||||||
Sbjct: 20 ggagcatcatcaagattcacaa 41
>40462_gma-MIR172e:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 92 tttgatatgggaatcttgatgatgctgc 119
|||| |||||||||||||||||||||||
Sbjct: 105 tttgctatgggaatcttgatgatgctgc 132
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcacaag 26
|||||||||||||||||||||||
Sbjct: 23 ggagcatcatcaagattcacaag 45
>40460_gma-MIR172c:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 92 tttgatatgggaatcttgatgatgctgc 119
|||| |||||||||||||||||||||||
Sbjct: 105 tttgctatgggaatcttgatgatgctgc 132
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcacaag 26
|||||||||||||||||||||||
Sbjct: 23 ggagcatcatcaagattcacaag 45
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcacaag 26
|||||||||||||||||||||||
Sbjct: 13 ggagcatcatcaagattcacaag 35
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 99 tgggaatcttgatgatgctgccgtggcaat 128
||||||||||||||||||||| | ||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcggcaat 141
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 tatgggaatcttgatgatgctgc 119
|||||||||||||||||||||||
Sbjct: 149 tatgggaatcttgatgatgctgc 171
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 gcatcatcaagattcacaag 26
||||||||||||||||||||
Sbjct: 16 gcatcatcaagattcacaag 35
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 99 tgggaatcttgatgatgctgccgtggcaat 128
||||||||||||||||||||| | ||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcggcaat 141
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 98 atgggaatcttgatgatgctgc 119
||||||||||||||||||||||
Sbjct: 101 atgggaatcttgatgatgctgc 122
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 98 atgggaatcttgatgatgctgc 119
||||||||||||||||||||||
Sbjct: 83 atgggaatcttgatgatgctgc 104
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 94 tgatatgggaatcttgatgatgctgc 119
||||||| ||||||||||||||||||
Sbjct: 91 tgatatgagaatcttgatgatgctgc 116
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 98 atgggaatcttgatgatgctgc 119
||||||||||||||||||||||
Sbjct: 120 atgggaatcttgatgatgctgc 141
>41050_ghr-MIR172:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcacaa 25
||||||||||||||||||||||
Sbjct: 18 ggagcatcatcaagattcacaa 39
>40065_ath-MIR172c:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcacaa 25
||||||||||||||||||||||
Sbjct: 18 ggagcatcatcaagattcacaa 39
>39854_aly-MIR172c:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcacaa 25
||||||||||||||||||||||
Sbjct: 18 ggagcatcatcaagattcacaa 39
>42779_zma-MIR172e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tgggaatcttgatgatgctgc 119
|||||||||||||||||||||
Sbjct: 133 tgggaatcttgatgatgctgc 153
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tgggaatcttgatgatgctgc 119
|||||||||||||||||||||
Sbjct: 148 tgggaatcttgatgatgctgc 168
>41991_osa-MIR172b:mirbase
Length = 238
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tgggaatcttgatgatgctgc 119
|||||||||||||||||||||
Sbjct: 206 tgggaatcttgatgatgctgc 226
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tgggaatcttgatgatgctgc 119
|||||||||||||||||||||
Sbjct: 202 tgggaatcttgatgatgctgc 222
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 ggagcatcatcaagattcaca 24
|||||||||||||||||||||
Sbjct: 13 ggagcatcatcaagattcaca 33
>40067_ath-MIR172e:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tgggaatcttgatgatgctgc 119
|||||||||||||||||||||
Sbjct: 93 tgggaatcttgatgatgctgc 113
>39856_aly-MIR172e:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 99 tgggaatcttgatgatgctgc 119
|||||||||||||||||||||
Sbjct: 96 tgggaatcttgatgatgctgc 116
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 92 tttgatatgggaatcttgatgatgctgc 119
||||| ||| ||||||||||||||||||
Sbjct: 70 tttgagatgagaatcttgatgatgctgc 97
>40459_gma-MIR172b:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 92 tttgatatgggaatcttgatgatgctgc 119
|||||| || ||||||||||||||||||
Sbjct: 105 tttgatgtgagaatcttgatgatgctgc 132
>40324_bra-MIR172b:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 atatgggaatcttgatgatgctgc 119
||||| ||||||||||||||||||
Sbjct: 77 atatgagaatcttgatgatgctgc 100
>40323_bra-MIR172a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 atatgggaatcttgatgatgctgc 119
||||| ||||||||||||||||||
Sbjct: 82 atatgagaatcttgatgatgctgc 105
>40307_bol-MIR172b:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 atatgggaatcttgatgatgctgc 119
||||| ||||||||||||||||||
Sbjct: 77 atatgagaatcttgatgatgctgc 100
>40306_bol-MIR172a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 atatgggaatcttgatgatgctgc 119
||||| ||||||||||||||||||
Sbjct: 82 atatgagaatcttgatgatgctgc 105
>40064_ath-MIR172b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 atatgggaatcttgatgatgctgc 119
||||| ||||||||||||||||||
Sbjct: 66 atatgagaatcttgatgatgctgc 89
>39853_aly-MIR172b:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 96 atatgggaatcttgatgatgctgc 119
||||| ||||||||||||||||||
Sbjct: 88 atatgagaatcttgatgatgctgc 111