miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41633_vvi-MIR172c:mirbase
          Length = 138

 Score =  216 bits (109), Expect = 3e-57
 Identities = 121/125 (96%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggagcatcatcaagattcacaagtattgagactcagtgcgtggtggtgatggtgacttat 63
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11  ggagcatcatcaagattcacaagtattgagactcagtgcgtggtggtgatggtgactttt 70

                                                                       
Query: 64  gtggtcccttcctacactccgatggctctttgatatgggaatcttgatgatgctgccgtg 123
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |
Sbjct: 71  gtggtcccttcctacactccgatggctctttgatgtgggaatcttgatgatgctgcagcg 130

                
Query: 124 gcaat 128
           |||||
Sbjct: 131 gcaat 135




>40461_gma-MIR172d:mirbase
          Length = 150

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 91  ctttgatatgggaatcttgatgatgctgc 119
           |||||||||||||||||||||||||||||
Sbjct: 101 ctttgatatgggaatcttgatgatgctgc 129



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 4  ggagcatcatcaagattcacaag 26
          |||||||||||||||||||||||
Sbjct: 23 ggagcatcatcaagattcacaag 45




>40366_rco-MIR172:mirbase
          Length = 144

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 91  ctttgatatgggaatcttgatgatgctgc 119
           |||||||||||||||||||||||||||||
Sbjct: 109 ctttgatatgggaatcttgatgatgctgc 137



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 4  ggagcatcatcaagattcacaa 25
          ||||||||||||||||||||||
Sbjct: 6  ggagcatcatcaagattcacaa 27




>41124_tcc-MIR172a:mirbase
          Length = 154

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 97  tatgggaatcttgatgatgctgccgtggcaat 128
           ||||||||||||||||||||||| | ||||||
Sbjct: 111 tatgggaatcttgatgatgctgcagcggcaat 142



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 4  ggagcatcatcaagattcacaa 25
          ||||||||||||||||||||||
Sbjct: 20 ggagcatcatcaagattcacaa 41




>40462_gma-MIR172e:mirbase
          Length = 153

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 92  tttgatatgggaatcttgatgatgctgc 119
           |||| |||||||||||||||||||||||
Sbjct: 105 tttgctatgggaatcttgatgatgctgc 132



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 4  ggagcatcatcaagattcacaag 26
          |||||||||||||||||||||||
Sbjct: 23 ggagcatcatcaagattcacaag 45




>40460_gma-MIR172c:mirbase
          Length = 153

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 92  tttgatatgggaatcttgatgatgctgc 119
           |||| |||||||||||||||||||||||
Sbjct: 105 tttgctatgggaatcttgatgatgctgc 132



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 4  ggagcatcatcaagattcacaag 26
          |||||||||||||||||||||||
Sbjct: 23 ggagcatcatcaagattcacaag 45




>41401_ptc-MIR172g:mirbase
          Length = 143

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 4  ggagcatcatcaagattcacaag 26
          |||||||||||||||||||||||
Sbjct: 13 ggagcatcatcaagattcacaag 35



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 99  tgggaatcttgatgatgctgccgtggcaat 128
           ||||||||||||||||||||| | ||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcggcaat 141




>41398_ptc-MIR172d:mirbase
          Length = 182

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 97  tatgggaatcttgatgatgctgc 119
           |||||||||||||||||||||||
Sbjct: 149 tatgggaatcttgatgatgctgc 171



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 7  gcatcatcaagattcacaag 26
          ||||||||||||||||||||
Sbjct: 16 gcatcatcaagattcacaag 35




>41402_ptc-MIR172h:mirbase
          Length = 143

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 99  tgggaatcttgatgatgctgccgtggcaat 128
           ||||||||||||||||||||| | ||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcggcaat 141




>41399_ptc-MIR172e:mirbase
          Length = 133

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 98  atgggaatcttgatgatgctgc 119
           ||||||||||||||||||||||
Sbjct: 101 atgggaatcttgatgatgctgc 122




>41184_aqc-MIR172b:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 98  atgggaatcttgatgatgctgc 119
           ||||||||||||||||||||||
Sbjct: 83  atgggaatcttgatgatgctgc 104




>41183_aqc-MIR172a:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 94  tgatatgggaatcttgatgatgctgc 119
           ||||||| ||||||||||||||||||
Sbjct: 91  tgatatgagaatcttgatgatgctgc 116




>41126_tcc-MIR172c:mirbase
          Length = 163

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 98  atgggaatcttgatgatgctgc 119
           ||||||||||||||||||||||
Sbjct: 120 atgggaatcttgatgatgctgc 141




>41050_ghr-MIR172:mirbase
          Length = 125

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 4  ggagcatcatcaagattcacaa 25
          ||||||||||||||||||||||
Sbjct: 18 ggagcatcatcaagattcacaa 39




>40065_ath-MIR172c:mirbase
          Length = 133

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 4  ggagcatcatcaagattcacaa 25
          ||||||||||||||||||||||
Sbjct: 18 ggagcatcatcaagattcacaa 39




>39854_aly-MIR172c:mirbase
          Length = 133

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 4  ggagcatcatcaagattcacaa 25
          ||||||||||||||||||||||
Sbjct: 18 ggagcatcatcaagattcacaa 39




>42779_zma-MIR172e:mirbase
          Length = 174

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  tgggaatcttgatgatgctgc 119
           |||||||||||||||||||||
Sbjct: 133 tgggaatcttgatgatgctgc 153




>42558_sbi-MIR172b:mirbase
          Length = 170

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  tgggaatcttgatgatgctgc 119
           |||||||||||||||||||||
Sbjct: 148 tgggaatcttgatgatgctgc 168




>41991_osa-MIR172b:mirbase
          Length = 238

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  tgggaatcttgatgatgctgc 119
           |||||||||||||||||||||
Sbjct: 206 tgggaatcttgatgatgctgc 226




>41768_bdi-MIR172b:mirbase
          Length = 254

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  tgggaatcttgatgatgctgc 119
           |||||||||||||||||||||
Sbjct: 202 tgggaatcttgatgatgctgc 222




>41396_ptc-MIR172b:mirbase
          Length = 140

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 4  ggagcatcatcaagattcaca 24
          |||||||||||||||||||||
Sbjct: 13 ggagcatcatcaagattcaca 33




>40067_ath-MIR172e:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  tgggaatcttgatgatgctgc 119
           |||||||||||||||||||||
Sbjct: 93  tgggaatcttgatgatgctgc 113




>39856_aly-MIR172e:mirbase
          Length = 133

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  tgggaatcttgatgatgctgc 119
           |||||||||||||||||||||
Sbjct: 96  tgggaatcttgatgatgctgc 116




>41634_vvi-MIR172d:mirbase
          Length = 109

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 92  tttgatatgggaatcttgatgatgctgc 119
           ||||| ||| ||||||||||||||||||
Sbjct: 70  tttgagatgagaatcttgatgatgctgc 97




>40459_gma-MIR172b:mirbase
          Length = 153

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 92  tttgatatgggaatcttgatgatgctgc 119
           |||||| || ||||||||||||||||||
Sbjct: 105 tttgatgtgagaatcttgatgatgctgc 132




>40324_bra-MIR172b:mirbase
          Length = 107

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  atatgggaatcttgatgatgctgc 119
           ||||| ||||||||||||||||||
Sbjct: 77  atatgagaatcttgatgatgctgc 100




>40323_bra-MIR172a:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  atatgggaatcttgatgatgctgc 119
           ||||| ||||||||||||||||||
Sbjct: 82  atatgagaatcttgatgatgctgc 105




>40307_bol-MIR172b:mirbase
          Length = 107

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  atatgggaatcttgatgatgctgc 119
           ||||| ||||||||||||||||||
Sbjct: 77  atatgagaatcttgatgatgctgc 100




>40306_bol-MIR172a:mirbase
          Length = 119

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  atatgggaatcttgatgatgctgc 119
           ||||| ||||||||||||||||||
Sbjct: 82  atatgagaatcttgatgatgctgc 105




>40064_ath-MIR172b:mirbase
          Length = 95

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  atatgggaatcttgatgatgctgc 119
           ||||| ||||||||||||||||||
Sbjct: 66  atatgagaatcttgatgatgctgc 89




>39853_aly-MIR172b:mirbase
          Length = 146

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  atatgggaatcttgatgatgctgc 119
           ||||| ||||||||||||||||||
Sbjct: 88  atatgagaatcttgatgatgctgc 111