miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41596_vvi-MIR168:mirbase
          Length = 132

 Score =  262 bits (132), Expect = 6e-71
 Identities = 132/132 (100%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggtctctaattcgcttggtgcaggtcgggaaccgacttcgccgctccggcagcgccggag 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggtctctaattcgcttggtgcaggtcgggaaccgacttcgccgctccggcagcgccggag 60

                                                                       
Query: 66  gcacgcggcggcctacgattggttgctgagcgaattccgatcccgccttgcatcaactga 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcacgcggcggcctacgattggttgctgagcgaattccgatcccgccttgcatcaactga 120

                       
Query: 126 atcggagacggc 137
           ||||||||||||
Sbjct: 121 atcggagacggc 132




>40448_gma-MIR168:mirbase
          Length = 125

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 6  ggtctctaattcgcttggtgcaggtcgggaaccg 39
          ||||||||||||||||||||||||||||||||||
Sbjct: 9  ggtctctaattcgcttggtgcaggtcgggaaccg 42



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 104 gatcccgccttgcatcaactgaatcggag 132
           |||||||||||||||||||||||||||||
Sbjct: 85  gatcccgccttgcatcaactgaatcggag 113




>41348_ptc-MIR168b:mirbase
          Length = 136

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 6  ggtctctaattcgcttggtgcaggtcgggaac 37
          ||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaac 32



 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 104 gatcccgccttgcatcaactgaatcggaga 133
           ||||||||||||||||||||||||||||||
Sbjct: 107 gatcccgccttgcatcaactgaatcggaga 136




>41215_crt-MIR168:mirbase
          Length = 201

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 6  ggtctctaattcgcttggtgcaggtcgggaac 37
          ||||||||||||||||||||||||||||||||
Sbjct: 11 ggtctctaattcgcttggtgcaggtcgggaac 42



 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 104 gatcccgccttgcatcaactgaatcggagac 134
           |||||||||||||||||||||||||||||||
Sbjct: 140 gatcccgccttgcatcaactgaatcggagac 170




>41210_ccl-MIR168:mirbase
          Length = 176

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 6  ggtctctaattcgcttggtgcaggtcgggaac 37
          ||||||||||||||||||||||||||||||||
Sbjct: 10 ggtctctaattcgcttggtgcaggtcgggaac 41



 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 104 gatcccgccttgcatcaactgaatcggagac 134
           |||||||||||||||||||||||||||||||
Sbjct: 139 gatcccgccttgcatcaactgaatcggagac 169




>41101_tcc-MIR168:mirbase
          Length = 167

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 6  ggtctctaattcgcttggtgcaggtcgggaac 37
          ||||||||||||||||||||||||||||||||
Sbjct: 11 ggtctctaattcgcttggtgcaggtcgggaac 42



 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                               
Query: 104 gatcccgccttgcatcaactgaatcggagacggcgg 139
           ||||||||||||||||||||||||||||||| ||||
Sbjct: 124 gatcccgccttgcatcaactgaatcggagaccgcgg 159




>41347_ptc-MIR168a:mirbase
          Length = 160

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 104 gatcccgccttgcatcaactgaatcggag 132
           |||||||||||||||||||||||||||||
Sbjct: 131 gatcccgccttgcatcaactgaatcggag 159



 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 6  ggtctctaattcgcttggtgcaggtcgggaac 37
          ||||||| ||||||||||||||||||||||||
Sbjct: 1  ggtctctgattcgcttggtgcaggtcgggaac 32




>40043_ath-MIR168a:mirbase
          Length = 138

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 104 gatcccgccttgcatcaactgaatcgga 131
           ||||||||||||||||||||||||||||
Sbjct: 100 gatcccgccttgcatcaactgaatcgga 127



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 14 attcgcttggtgcaggtcgggaacc 38
          |||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40




>39832_aly-MIR168a:mirbase
          Length = 155

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 104 gatcccgccttgcatcaactgaatcgga 131
           ||||||||||||||||||||||||||||
Sbjct: 106 gatcccgccttgcatcaactgaatcgga 133



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 14 attcgcttggtgcaggtcgggaacc 38
          |||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaacc 46




>42742_zma-MIR168b:mirbase
          Length = 104

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 104 gatcccgccttgcatcaactgaatcggagacggcg 138
           |||||||||||||||||| |||||||||| |||||
Sbjct: 64  gatcccgccttgcatcaagtgaatcggagccggcg 98




>40355_rco-MIR168:mirbase
          Length = 131

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 11 ctaattcgcttggtgcaggtcgggaac 37
          |||||||||||||||||||||||||||
Sbjct: 1  ctaattcgcttggtgcaggtcgggaac 27



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 104 gatcccgccttgcatcaactgaatcg 129
           ||||||||||||||||||||||||||
Sbjct: 103 gatcccgccttgcatcaactgaatcg 128




>42741_zma-MIR168a:mirbase
          Length = 104

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 104 gatcccgccttgcatcaactgaatcggagacggcgg 139
           |||||||||||||| ||| |||||||||| ||||||
Sbjct: 64  gatcccgccttgcaccaagtgaatcggagccggcgg 99




>40044_ath-MIR168b:mirbase
          Length = 124

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attcgcttggtgcaggtcgggaac 37
          ||||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcgggaac 40




>39833_aly-MIR168b:mirbase
          Length = 176

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 attcgcttggtgcaggtcgggaac 37
          ||||||||||||||||||||||||
Sbjct: 41 attcgcttggtgcaggtcgggaac 64



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 104 gatcccgccttgcatcaactgaatcggag 132
           ||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138




>42470_ssp-MIR168a:mirbase
          Length = 99

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 104 gatcccgccttgcatcaactgaatcggagacggcg 138
           |||||||||||||| ||| |||||||||| |||||
Sbjct: 61  gatcccgccttgcaccaagtgaatcggagccggcg 95




>42460_sof-MIR168b:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 104 gatcccgccttgcatcaactgaatcggagacggcg 138
           |||||||||||||| ||| |||||||||| |||||
Sbjct: 63  gatcccgccttgcaccaagtgaatcggagccggcg 97




>42459_sof-MIR168a:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 104 gatcccgccttgcatcaactgaatcggagacggcg 138
           |||||||||||||| ||| |||||||||| |||||
Sbjct: 64  gatcccgccttgcaccaagtgaatcggagccggcg 98




>41888_hvu-MIR168:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 104 gatcccgccttgcatcaactgaatcggagacggcg 138
           |||||||||||||| ||| |||||||||| |||||
Sbjct: 67  gatcccgccttgcaccaagtgaatcggagccggcg 101




>41887_hvu-MIR168:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 104 gatcccgccttgcatcaactgaatcggagacggcg 138
           |||||||||||||| ||| |||||||||| |||||
Sbjct: 67  gatcccgccttgcaccaagtgaatcggagccggcg 101




>41753_bdi-MIR168:mirbase
          Length = 136

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 104 gatcccgccttgcatcaactgaatcggagacggcg 138
           |||||||||||||| ||| |||||||||| |||||
Sbjct: 76  gatcccgccttgcaccaagtgaatcggagccggcg 110




>40271_bna-MIR168:mirbase
          Length = 133

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tcgcttggtgcaggtcgggaac 37
          ||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39




>41962_osa-MIR168a:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 104 gatcccgccttgcatcaactgaatcggag 132
           |||||||||||||| ||| ||||||||||
Sbjct: 56  gatcccgccttgcaccaagtgaatcggag 84




>41961_osa-MIR168a:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 104 gatcccgccttgcatcaactgaatcggag 132
           |||||||||||||| ||| ||||||||||
Sbjct: 56  gatcccgccttgcaccaagtgaatcggag 84