miRNEST 2.0, an integrative microRNA resource :: BLAST
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 268 bits (135), Expect = 1e-72
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattcccacatcaaagagccatcggagtgtaggaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tattgccgctgcagcatcatcaagattcccacatcaaagagccatcggagtgtaggaagg 77
Query: 61 gaccacaaaagtcaccatcaccaccacgcactgagtctcaatacttgtgaatcttgatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gaccacaaaagtcaccatcaccaccacgcactgagtctcaatacttgtgaatcttgatga 17
Query: 121 tgctccatccgcaaa 135
|||||||||||||||
Sbjct: 16 tgctccatccgcaaa 2
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 69.9 bits (35), Expect = 5e-13
Identities = 112/133 (84%), Gaps = 6/133 (4%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattcccacatcaaagagccatcggagtg-taggaag 59
||||||||||||||||||||||||||||||| |||||| || || ||| || | |||
Sbjct: 142 tattgccgctgcagcatcatcaagattcccaattcaaagggctattggattgaaaaaaag 83
Query: 60 ggacca-caaaagtcaccatcaccaccacgcactgagtctcaata---cttgtgaatctt 115
|||||| |||||| |||||||| |||||| |||| || | |||| ||||||||||||
Sbjct: 82 ggaccaccaaaagccaccatcatcaccacacact-agccctaataaagcttgtgaatctt 24
Query: 116 gatgatgctccat 128
|||||||||||||
Sbjct: 23 gatgatgctccat 11
>40366_rco-MIR172:mirbase
Length = 144
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 4 tgccgctgcagcatcatcaagattcccacatcaaag 39
|||||||||||||||||||||||||||| |||||||
Sbjct: 144 tgccgctgcagcatcatcaagattcccatatcaaag 109
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 105 ttgtgaatcttgatgatgctccatc 129
|||||||||||||||||||||||||
Sbjct: 27 ttgtgaatcttgatgatgctccatc 3
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattccca 31
|||||||||||||||||||||||||||||||
Sbjct: 142 tattgccgctgcagcatcatcaagattccca 112
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 105 ttgtgaatcttgatgatgctccatccgcaaa 135
||||||||||||||| ||||||||| |||||
Sbjct: 34 ttgtgaatcttgatggtgctccatcggcaaa 4
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattccca 31
|||||||||||||||||||||||||||||||
Sbjct: 143 tattgccgctgcagcatcatcaagattccca 113
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 ttgtgaatcttgatgatgctccatccgcaaa 135
||||||||||||||||||||||||| |||||
Sbjct: 41 ttgtgaatcttgatgatgctccatcagcaaa 11
>40461_gma-MIR172d:mirbase
Length = 150
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattcccacatcaaag 39
|||||| |||||||||||||||||||||||| |||||||
Sbjct: 139 tattgctgctgcagcatcatcaagattcccatatcaaag 101
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 104 cttgtgaatcttgatgatgctccatccgcaa 134
|||||||||||||||||||||||||| ||||
Sbjct: 45 cttgtgaatcttgatgatgctccatctgcaa 15
>40462_gma-MIR172e:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattccca 31
|||||| ||||||||||||||||||||||||
Sbjct: 142 tattgctgctgcagcatcatcaagattccca 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 104 cttgtgaatcttgatgatgctcca 127
||||||||||||||||||||||||
Sbjct: 45 cttgtgaatcttgatgatgctcca 22
>40460_gma-MIR172c:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattccca 31
|||||| ||||||||||||||||||||||||
Sbjct: 142 tattgctgctgcagcatcatcaagattccca 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 104 cttgtgaatcttgatgatgctcca 127
||||||||||||||||||||||||
Sbjct: 45 cttgtgaatcttgatgatgctcca 22
>40066_ath-MIR172d:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 2 attgccgctgcagcatcatcaagattc 28
|||||||||||||||||||||||||||
Sbjct: 115 attgccgctgcagcatcatcaagattc 89
>39855_aly-MIR172d:mirbase
Length = 163
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 2 attgccgctgcagcatcatcaagattc 28
|||||||||||||||||||||||||||
Sbjct: 139 attgccgctgcagcatcatcaagattc 113
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 106 tgtgaatcttgatgatgctccatccgcaaa 135
|||||||||||||||||||||| |||||||
Sbjct: 33 tgtgaatcttgatgatgctccacccgcaaa 4
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattc 28
|||||||| |||||||||||||||||||
Sbjct: 139 tattgccgatgcagcatcatcaagattc 112
>40459_gma-MIR172b:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 106 tgtgaatcttgatgatgctccatccgcaaa 135
||||||||||||||||||| ||||||||||
Sbjct: 43 tgtgaatcttgatgatgctacatccgcaaa 14
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 10 tgcagcatcatcaagattcccacatcaaa 38
||||||||||||||||||| |||||||||
Sbjct: 133 tgcagcatcatcaagattctcacatcaaa 105
>40458_gma-MIR172a:mirbase
Length = 159
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 106 tgtgaatcttgatgatgctccatccgcaaa 135
||||||||||||||||||| ||||||||||
Sbjct: 43 tgtgaatcttgatgatgctacatccgcaaa 14
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3 ttgccgctgcagcatcatcaagattccca 31
|||||| ||||||||||||||||||||||
Sbjct: 130 ttgccgatgcagcatcatcaagattccca 102
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3 ttgccgctgcagcatcatcaagattccca 31
|||||| ||||||||||||||||||||||
Sbjct: 179 ttgccgatgcagcatcatcaagattccca 151
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 104 cttgtgaatcttgatgatgctccatccgc 132
|||||||||||||||||||| |||||||
Sbjct: 35 cttgtgaatcttgatgatgccgcatccgc 7
>42779_zma-MIR172e:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 tgcagcatcatcaagattcccaca 33
||||||||||||||||||||||||
Sbjct: 154 tgcagcatcatcaagattcccaca 131
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 tgcagcatcatcaagattcccaca 33
||||||||||||||||||||||||
Sbjct: 169 tgcagcatcatcaagattcccaca 146
>41991_osa-MIR172b:mirbase
Length = 238
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 tgcagcatcatcaagattcccaca 33
||||||||||||||||||||||||
Sbjct: 227 tgcagcatcatcaagattcccaca 204
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 tgcagcatcatcaagattcccaca 33
||||||||||||||||||||||||
Sbjct: 223 tgcagcatcatcaagattcccaca 200
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tattgccgctgcagcatcatcaagattc 28
|||||||| |||||||||||||||||||
Sbjct: 1 tattgccgatgcagcatcatcaagattc 28
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tattgccgctgcagcatcatcaagattc 28
|||||||| |||||||||||||||||||
Sbjct: 1 tattgccgatgcagcatcatcaagattc 28
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 106 tgtgaatcttgatgatgctccatccgcaaa 135
||||||||||||||||||| ||| ||||||
Sbjct: 78 tgtgaatcttgatgatgctacatgcgcaaa 107
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattc 28
|||||||| |||||||||||||||||||
Sbjct: 160 tattgccgatgcagcatcatcaagattc 133
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattc 28
|||||||| |||||||||||||||||||
Sbjct: 177 tattgccgatgcagcatcatcaagattc 150
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 106 tgtgaatcttgatgatgctccatccgcaaa 135
||||||||||||||||||| || |||||||
Sbjct: 43 tgtgaatcttgatgatgctacacccgcaaa 14
>41050_ghr-MIR172:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 105 ttgtgaatcttgatgatgctcca 127
|||||||||||||||||||||||
Sbjct: 39 ttgtgaatcttgatgatgctcca 17
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1 tattgccgctgcagcatcatcaagattc 28
||||||| |||||||||||||| |||||
Sbjct: 118 tattgccactgcagcatcatcaggattc 91
>40463_gma-MIR172f:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 106 tgtgaatcttgatgatgctccatccgc 132
||||||||||||||||||| |||||||
Sbjct: 27 tgtgaatcttgatgatgctacatccgc 1
>40067_ath-MIR172e:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tgcagcatcatcaagattcccac 32
|||||||||||||||||||||||
Sbjct: 114 tgcagcatcatcaagattcccac 92
>40065_ath-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 105 ttgtgaatcttgatgatgctcca 127
|||||||||||||||||||||||
Sbjct: 39 ttgtgaatcttgatgatgctcca 17
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 2 attgccgctgcagcatcatcaagattc 28
||||| |||||||||||||||||||||
Sbjct: 125 attgcagctgcagcatcatcaagattc 99
>39856_aly-MIR172e:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tgcagcatcatcaagattcccac 32
|||||||||||||||||||||||
Sbjct: 117 tgcagcatcatcaagattcccac 95
>39854_aly-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 105 ttgtgaatcttgatgatgctcca 127
|||||||||||||||||||||||
Sbjct: 39 ttgtgaatcttgatgatgctcca 17
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 2 attgccgctgcagcatcatcaagattc 28
||||| |||||||||||||||||||||
Sbjct: 125 attgcagctgcagcatcatcaagattc 99
>39852_aly-MIR172a:mirbase
Length = 149
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 2 attgccgctgcagcatcatcaagattc 28
||||||| |||||||||||||||||||
Sbjct: 126 attgccgatgcagcatcatcaagattc 100
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 ttgccgctgcagcatcatcaagattc 28
|||||| |||||||||||||||||||
Sbjct: 125 ttgccgatgcagcatcatcaagattc 100
>41235_csi-MIR172c:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 gctgcagcatcatcaagattcc 29
||||||||||||||||||||||
Sbjct: 141 gctgcagcatcatcaagattcc 120
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 tgcagcatcatcaagattccca 31
||||||||||||||||||||||
Sbjct: 105 tgcagcatcatcaagattccca 84
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 tgcagcatcatcaagattccca 31
||||||||||||||||||||||
Sbjct: 142 tgcagcatcatcaagattccca 121
>41990_osa-MIR172a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctccatccgca 133
|||||||||||||||| ||||||||
Sbjct: 80 gaatcttgatgatgctgcatccgca 104
>41725_ata-MIR172:mirbase
Length = 277
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 109 gaatcttgatgatgctccatccgca 133
|||||||||||||||| ||||||||
Sbjct: 210 gaatcttgatgatgctgcatccgca 234
>42561_sbi-MIR172e:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 10 tgcagcatcatcaagattcccaca 33
||||||||||||||||||| ||||
Sbjct: 95 tgcagcatcatcaagattcacaca 72
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 106 tgtgaatcttgatgatgctccatc 129
||||||||||||||||||| ||||
Sbjct: 31 tgtgaatcttgatgatgctgcatc 8
>41233_csi-MIR172a:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 gccgctgcagcatcatcaagattc 28
|||| |||||||||||||||||||
Sbjct: 139 gccgttgcagcatcatcaagattc 116
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 gccgctgcagcatcatcaagattc 28
|||| |||||||||||||||||||
Sbjct: 144 gccgatgcagcatcatcaagattc 121
>40702_mtr-MIR172:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 104 cttgtgaatcttgatgatgctcca 127
|||||||||| |||||||||||||
Sbjct: 29 cttgtgaatcctgatgatgctcca 6
>40063_ath-MIR172a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 gccgctgcagcatcatcaagattc 28
|||| |||||||||||||||||||
Sbjct: 102 gccgatgcagcatcatcaagattc 79