miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41633_vvi-MIR172c:mirbase
          Length = 138

 Score =  268 bits (135), Expect = 1e-72
 Identities = 135/135 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tattgccgctgcagcatcatcaagattcccacatcaaagagccatcggagtgtaggaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tattgccgctgcagcatcatcaagattcccacatcaaagagccatcggagtgtaggaagg 77

                                                                       
Query: 61  gaccacaaaagtcaccatcaccaccacgcactgagtctcaatacttgtgaatcttgatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  gaccacaaaagtcaccatcaccaccacgcactgagtctcaatacttgtgaatcttgatga 17

                          
Query: 121 tgctccatccgcaaa 135
           |||||||||||||||
Sbjct: 16  tgctccatccgcaaa 2




>41401_ptc-MIR172g:mirbase
          Length = 143

 Score = 69.9 bits (35), Expect = 5e-13
 Identities = 112/133 (84%), Gaps = 6/133 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   tattgccgctgcagcatcatcaagattcccacatcaaagagccatcggagtg-taggaag 59
           |||||||||||||||||||||||||||||||  |||||| || || ||| ||  |  |||
Sbjct: 142 tattgccgctgcagcatcatcaagattcccaattcaaagggctattggattgaaaaaaag 83

                                                                       
Query: 60  ggacca-caaaagtcaccatcaccaccacgcactgagtctcaata---cttgtgaatctt 115
           |||||| |||||| |||||||| |||||| |||| || |  ||||   ||||||||||||
Sbjct: 82  ggaccaccaaaagccaccatcatcaccacacact-agccctaataaagcttgtgaatctt 24

                        
Query: 116 gatgatgctccat 128
           |||||||||||||
Sbjct: 23  gatgatgctccat 11




>40366_rco-MIR172:mirbase
          Length = 144

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 4   tgccgctgcagcatcatcaagattcccacatcaaag 39
           |||||||||||||||||||||||||||| |||||||
Sbjct: 144 tgccgctgcagcatcatcaagattcccatatcaaag 109



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 105 ttgtgaatcttgatgatgctccatc 129
           |||||||||||||||||||||||||
Sbjct: 27  ttgtgaatcttgatgatgctccatc 3




>41402_ptc-MIR172h:mirbase
          Length = 143

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                          
Query: 1   tattgccgctgcagcatcatcaagattccca 31
           |||||||||||||||||||||||||||||||
Sbjct: 142 tattgccgctgcagcatcatcaagattccca 112



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 105 ttgtgaatcttgatgatgctccatccgcaaa 135
           ||||||||||||||| ||||||||| |||||
Sbjct: 34  ttgtgaatcttgatggtgctccatcggcaaa 4




>41124_tcc-MIR172a:mirbase
          Length = 154

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                          
Query: 1   tattgccgctgcagcatcatcaagattccca 31
           |||||||||||||||||||||||||||||||
Sbjct: 143 tattgccgctgcagcatcatcaagattccca 113



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 105 ttgtgaatcttgatgatgctccatccgcaaa 135
           ||||||||||||||||||||||||| |||||
Sbjct: 41  ttgtgaatcttgatgatgctccatcagcaaa 11




>40461_gma-MIR172d:mirbase
          Length = 150

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 1   tattgccgctgcagcatcatcaagattcccacatcaaag 39
           |||||| |||||||||||||||||||||||| |||||||
Sbjct: 139 tattgctgctgcagcatcatcaagattcccatatcaaag 101



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 104 cttgtgaatcttgatgatgctccatccgcaa 134
           |||||||||||||||||||||||||| ||||
Sbjct: 45  cttgtgaatcttgatgatgctccatctgcaa 15




>40462_gma-MIR172e:mirbase
          Length = 153

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 1   tattgccgctgcagcatcatcaagattccca 31
           |||||| ||||||||||||||||||||||||
Sbjct: 142 tattgctgctgcagcatcatcaagattccca 112



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 104 cttgtgaatcttgatgatgctcca 127
           ||||||||||||||||||||||||
Sbjct: 45  cttgtgaatcttgatgatgctcca 22




>40460_gma-MIR172c:mirbase
          Length = 153

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 1   tattgccgctgcagcatcatcaagattccca 31
           |||||| ||||||||||||||||||||||||
Sbjct: 142 tattgctgctgcagcatcatcaagattccca 112



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 104 cttgtgaatcttgatgatgctcca 127
           ||||||||||||||||||||||||
Sbjct: 45  cttgtgaatcttgatgatgctcca 22




>40066_ath-MIR172d:mirbase
          Length = 124

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 2   attgccgctgcagcatcatcaagattc 28
           |||||||||||||||||||||||||||
Sbjct: 115 attgccgctgcagcatcatcaagattc 89




>39855_aly-MIR172d:mirbase
          Length = 163

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 2   attgccgctgcagcatcatcaagattc 28
           |||||||||||||||||||||||||||
Sbjct: 139 attgccgctgcagcatcatcaagattc 113




>41396_ptc-MIR172b:mirbase
          Length = 140

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 106 tgtgaatcttgatgatgctccatccgcaaa 135
           |||||||||||||||||||||| |||||||
Sbjct: 33  tgtgaatcttgatgatgctccacccgcaaa 4



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 1   tattgccgctgcagcatcatcaagattc 28
           |||||||| |||||||||||||||||||
Sbjct: 139 tattgccgatgcagcatcatcaagattc 112




>40459_gma-MIR172b:mirbase
          Length = 153

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 106 tgtgaatcttgatgatgctccatccgcaaa 135
           ||||||||||||||||||| ||||||||||
Sbjct: 43  tgtgaatcttgatgatgctacatccgcaaa 14



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 10  tgcagcatcatcaagattcccacatcaaa 38
           ||||||||||||||||||| |||||||||
Sbjct: 133 tgcagcatcatcaagattctcacatcaaa 105




>40458_gma-MIR172a:mirbase
          Length = 159

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 106 tgtgaatcttgatgatgctccatccgcaaa 135
           ||||||||||||||||||| ||||||||||
Sbjct: 43  tgtgaatcttgatgatgctacatccgcaaa 14




>41399_ptc-MIR172e:mirbase
          Length = 133

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 3   ttgccgctgcagcatcatcaagattccca 31
           |||||| ||||||||||||||||||||||
Sbjct: 130 ttgccgatgcagcatcatcaagattccca 102




>41398_ptc-MIR172d:mirbase
          Length = 182

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 3   ttgccgctgcagcatcatcaagattccca 31
           |||||| ||||||||||||||||||||||
Sbjct: 179 ttgccgatgcagcatcatcaagattccca 151



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 104 cttgtgaatcttgatgatgctccatccgc 132
           ||||||||||||||||||||  |||||||
Sbjct: 35  cttgtgaatcttgatgatgccgcatccgc 7




>42779_zma-MIR172e:mirbase
          Length = 174

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 10  tgcagcatcatcaagattcccaca 33
           ||||||||||||||||||||||||
Sbjct: 154 tgcagcatcatcaagattcccaca 131




>42558_sbi-MIR172b:mirbase
          Length = 170

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 10  tgcagcatcatcaagattcccaca 33
           ||||||||||||||||||||||||
Sbjct: 169 tgcagcatcatcaagattcccaca 146




>41991_osa-MIR172b:mirbase
          Length = 238

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 10  tgcagcatcatcaagattcccaca 33
           ||||||||||||||||||||||||
Sbjct: 227 tgcagcatcatcaagattcccaca 204




>41768_bdi-MIR172b:mirbase
          Length = 254

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 10  tgcagcatcatcaagattcccaca 33
           ||||||||||||||||||||||||
Sbjct: 223 tgcagcatcatcaagattcccaca 200




>41632_vvi-MIR172b:mirbase
          Length = 118

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 1  tattgccgctgcagcatcatcaagattc 28
          |||||||| |||||||||||||||||||
Sbjct: 1  tattgccgatgcagcatcatcaagattc 28




>41631_vvi-MIR172a:mirbase
          Length = 110

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 1  tattgccgctgcagcatcatcaagattc 28
          |||||||| |||||||||||||||||||
Sbjct: 1  tattgccgatgcagcatcatcaagattc 28



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 106 tgtgaatcttgatgatgctccatccgcaaa 135
           ||||||||||||||||||| ||| ||||||
Sbjct: 78  tgtgaatcttgatgatgctacatgcgcaaa 107




>41400_ptc-MIR172f:mirbase
          Length = 161

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 1   tattgccgctgcagcatcatcaagattc 28
           |||||||| |||||||||||||||||||
Sbjct: 160 tattgccgatgcagcatcatcaagattc 133




>41128_tcc-MIR172e:mirbase
          Length = 189

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 1   tattgccgctgcagcatcatcaagattc 28
           |||||||| |||||||||||||||||||
Sbjct: 177 tattgccgatgcagcatcatcaagattc 150



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 106 tgtgaatcttgatgatgctccatccgcaaa 135
           ||||||||||||||||||| || |||||||
Sbjct: 43  tgtgaatcttgatgatgctacacccgcaaa 14




>41050_ghr-MIR172:mirbase
          Length = 125

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 105 ttgtgaatcttgatgatgctcca 127
           |||||||||||||||||||||||
Sbjct: 39  ttgtgaatcttgatgatgctcca 17



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 1   tattgccgctgcagcatcatcaagattc 28
           ||||||| |||||||||||||| |||||
Sbjct: 118 tattgccactgcagcatcatcaggattc 91




>40463_gma-MIR172f:mirbase
          Length = 133

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 106 tgtgaatcttgatgatgctccatccgc 132
           ||||||||||||||||||| |||||||
Sbjct: 27  tgtgaatcttgatgatgctacatccgc 1




>40067_ath-MIR172e:mirbase
          Length = 125

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  tgcagcatcatcaagattcccac 32
           |||||||||||||||||||||||
Sbjct: 114 tgcagcatcatcaagattcccac 92




>40065_ath-MIR172c:mirbase
          Length = 133

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 105 ttgtgaatcttgatgatgctcca 127
           |||||||||||||||||||||||
Sbjct: 39  ttgtgaatcttgatgatgctcca 17



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 2   attgccgctgcagcatcatcaagattc 28
           ||||| |||||||||||||||||||||
Sbjct: 125 attgcagctgcagcatcatcaagattc 99




>39856_aly-MIR172e:mirbase
          Length = 133

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 10  tgcagcatcatcaagattcccac 32
           |||||||||||||||||||||||
Sbjct: 117 tgcagcatcatcaagattcccac 95




>39854_aly-MIR172c:mirbase
          Length = 133

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 105 ttgtgaatcttgatgatgctcca 127
           |||||||||||||||||||||||
Sbjct: 39  ttgtgaatcttgatgatgctcca 17



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 2   attgccgctgcagcatcatcaagattc 28
           ||||| |||||||||||||||||||||
Sbjct: 125 attgcagctgcagcatcatcaagattc 99




>39852_aly-MIR172a:mirbase
          Length = 149

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 2   attgccgctgcagcatcatcaagattc 28
           ||||||| |||||||||||||||||||
Sbjct: 126 attgccgatgcagcatcatcaagattc 100




>41767_bdi-MIR172a:mirbase
          Length = 153

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 3   ttgccgctgcagcatcatcaagattc 28
           |||||| |||||||||||||||||||
Sbjct: 125 ttgccgatgcagcatcatcaagattc 100




>41235_csi-MIR172c:mirbase
          Length = 163

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 8   gctgcagcatcatcaagattcc 29
           ||||||||||||||||||||||
Sbjct: 141 gctgcagcatcatcaagattcc 120




>41184_aqc-MIR172b:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 10  tgcagcatcatcaagattccca 31
           ||||||||||||||||||||||
Sbjct: 105 tgcagcatcatcaagattccca 84




>41126_tcc-MIR172c:mirbase
          Length = 163

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 10  tgcagcatcatcaagattccca 31
           ||||||||||||||||||||||
Sbjct: 142 tgcagcatcatcaagattccca 121




>41990_osa-MIR172a:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 109 gaatcttgatgatgctccatccgca 133
           |||||||||||||||| ||||||||
Sbjct: 80  gaatcttgatgatgctgcatccgca 104




>41725_ata-MIR172:mirbase
          Length = 277

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 109 gaatcttgatgatgctccatccgca 133
           |||||||||||||||| ||||||||
Sbjct: 210 gaatcttgatgatgctgcatccgca 234




>42561_sbi-MIR172e:mirbase
          Length = 115

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 10 tgcagcatcatcaagattcccaca 33
          ||||||||||||||||||| ||||
Sbjct: 95 tgcagcatcatcaagattcacaca 72




>41634_vvi-MIR172d:mirbase
          Length = 109

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 106 tgtgaatcttgatgatgctccatc 129
           ||||||||||||||||||| ||||
Sbjct: 31  tgtgaatcttgatgatgctgcatc 8




>41233_csi-MIR172a:mirbase
          Length = 162

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 5   gccgctgcagcatcatcaagattc 28
           |||| |||||||||||||||||||
Sbjct: 139 gccgttgcagcatcatcaagattc 116




>41125_tcc-MIR172b:mirbase
          Length = 160

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 5   gccgctgcagcatcatcaagattc 28
           |||| |||||||||||||||||||
Sbjct: 144 gccgatgcagcatcatcaagattc 121




>40702_mtr-MIR172:mirbase
          Length = 113

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 cttgtgaatcttgatgatgctcca 127
           |||||||||| |||||||||||||
Sbjct: 29  cttgtgaatcctgatgatgctcca 6




>40063_ath-MIR172a:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 5   gccgctgcagcatcatcaagattc 28
           |||| |||||||||||||||||||
Sbjct: 102 gccgatgcagcatcatcaagattc 79