miRNEST 2.0, an integrative microRNA resource :: BLAST
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 272 bits (137), Expect = 6e-74
Identities = 137/137 (100%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattcccacatcaaagagccatcggagtgtaggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ttattgccgctgcagcatcatcaagattcccacatcaaagagccatcggagtgtaggaag 78
Query: 61 ggaccacaaaagtcaccatcaccaccacgcactgagtctcaatacttgtgaatcttgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 ggaccacaaaagtcaccatcaccaccacgcactgagtctcaatacttgtgaatcttgatg 18
Query: 121 atgctccatccgcaaac 137
|||||||||||||||||
Sbjct: 17 atgctccatccgcaaac 1
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 71.9 bits (36), Expect = 1e-13
Identities = 113/134 (84%), Gaps = 6/134 (4%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattcccacatcaaagagccatcggagtg-taggaa 59
|||||||||||||||||||||||||||||||| |||||| || || ||| || | ||
Sbjct: 143 ttattgccgctgcagcatcatcaagattcccaattcaaagggctattggattgaaaaaaa 84
Query: 60 gggacca-caaaagtcaccatcaccaccacgcactgagtctcaata---cttgtgaatct 115
||||||| |||||| |||||||| |||||| |||| || | |||| |||||||||||
Sbjct: 83 gggaccaccaaaagccaccatcatcaccacacact-agccctaataaagcttgtgaatct 25
Query: 116 tgatgatgctccat 129
||||||||||||||
Sbjct: 24 tgatgatgctccat 11
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattccca 32
||||||||||||||||||||||||||||||||
Sbjct: 143 ttattgccgctgcagcatcatcaagattccca 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 106 ttgtgaatcttgatgatgctccatccgcaaac 137
||||||||||||||| ||||||||| ||||||
Sbjct: 34 ttgtgaatcttgatggtgctccatcggcaaac 3
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattccca 32
||||||||||||||||||||||||||||||||
Sbjct: 144 ttattgccgctgcagcatcatcaagattccca 113
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 106 ttgtgaatcttgatgatgctccatccgcaaac 137
||||||||||||||||||||||||| ||||||
Sbjct: 41 ttgtgaatcttgatgatgctccatcagcaaac 10
>40461_gma-MIR172d:mirbase
Length = 150
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattcccacatcaaag 40
||||||| |||||||||||||||||||||||| |||||||
Sbjct: 140 ttattgctgctgcagcatcatcaagattcccatatcaaag 101
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 cttgtgaatcttgatgatgctccatccgcaa 135
|||||||||||||||||||||||||| ||||
Sbjct: 45 cttgtgaatcttgatgatgctccatctgcaa 15
>40366_rco-MIR172:mirbase
Length = 144
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 5 tgccgctgcagcatcatcaagattcccacatcaaag 40
|||||||||||||||||||||||||||| |||||||
Sbjct: 144 tgccgctgcagcatcatcaagattcccatatcaaag 109
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 106 ttgtgaatcttgatgatgctccatc 130
|||||||||||||||||||||||||
Sbjct: 27 ttgtgaatcttgatgatgctccatc 3
>40462_gma-MIR172e:mirbase
Length = 153
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattccca 32
||||||| ||||||||||||||||||||||||
Sbjct: 143 ttattgctgctgcagcatcatcaagattccca 112
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 105 cttgtgaatcttgatgatgctccatccgcaaac 137
|||||||||||||||||||||||| | ||||||
Sbjct: 45 cttgtgaatcttgatgatgctccaccggcaaac 13
>40460_gma-MIR172c:mirbase
Length = 153
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattccca 32
||||||| ||||||||||||||||||||||||
Sbjct: 143 ttattgctgctgcagcatcatcaagattccca 112
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 105 cttgtgaatcttgatgatgctccatccgcaaac 137
|||||||||||||||||||||||| | ||||||
Sbjct: 45 cttgtgaatcttgatgatgctccaccggcaaac 13
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 107 tgtgaatcttgatgatgctccatccgcaaac 137
|||||||||||||||||||||| ||||||||
Sbjct: 33 tgtgaatcttgatgatgctccacccgcaaac 3
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattc 29
||||||||| |||||||||||||||||||
Sbjct: 140 ttattgccgatgcagcatcatcaagattc 112
>40459_gma-MIR172b:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 107 tgtgaatcttgatgatgctccatccgcaaac 137
||||||||||||||||||| |||||||||||
Sbjct: 43 tgtgaatcttgatgatgctacatccgcaaac 13
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 11 tgcagcatcatcaagattcccacatcaaa 39
||||||||||||||||||| |||||||||
Sbjct: 133 tgcagcatcatcaagattctcacatcaaa 105
>40066_ath-MIR172d:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 3 attgccgctgcagcatcatcaagattc 29
|||||||||||||||||||||||||||
Sbjct: 115 attgccgctgcagcatcatcaagattc 89
>39855_aly-MIR172d:mirbase
Length = 163
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 3 attgccgctgcagcatcatcaagattc 29
|||||||||||||||||||||||||||
Sbjct: 139 attgccgctgcagcatcatcaagattc 113
>40458_gma-MIR172a:mirbase
Length = 159
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 107 tgtgaatcttgatgatgctccatccgcaaa 136
||||||||||||||||||| ||||||||||
Sbjct: 43 tgtgaatcttgatgatgctacatccgcaaa 14
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattc 29
||||||||| |||||||||||||||||||
Sbjct: 161 ttattgccgatgcagcatcatcaagattc 133
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 4 ttgccgctgcagcatcatcaagattccca 32
|||||| ||||||||||||||||||||||
Sbjct: 130 ttgccgatgcagcatcatcaagattccca 102
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 4 ttgccgctgcagcatcatcaagattccca 32
|||||| ||||||||||||||||||||||
Sbjct: 179 ttgccgatgcagcatcatcaagattccca 151
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 105 cttgtgaatcttgatgatgctccatccgc 133
|||||||||||||||||||| |||||||
Sbjct: 35 cttgtgaatcttgatgatgccgcatccgc 7
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattc 29
||||||||| |||||||||||||||||||
Sbjct: 178 ttattgccgatgcagcatcatcaagattc 150
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 107 tgtgaatcttgatgatgctccatccgcaaac 137
||||||||||||||||||| || ||||||||
Sbjct: 43 tgtgaatcttgatgatgctacacccgcaaac 13
>42779_zma-MIR172e:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 11 tgcagcatcatcaagattcccaca 34
||||||||||||||||||||||||
Sbjct: 154 tgcagcatcatcaagattcccaca 131
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 11 tgcagcatcatcaagattcccaca 34
||||||||||||||||||||||||
Sbjct: 169 tgcagcatcatcaagattcccaca 146
>41991_osa-MIR172b:mirbase
Length = 238
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 11 tgcagcatcatcaagattcccaca 34
||||||||||||||||||||||||
Sbjct: 227 tgcagcatcatcaagattcccaca 204
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 11 tgcagcatcatcaagattcccaca 34
||||||||||||||||||||||||
Sbjct: 223 tgcagcatcatcaagattcccaca 200
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tattgccgctgcagcatcatcaagattc 29
|||||||| |||||||||||||||||||
Sbjct: 1 tattgccgatgcagcatcatcaagattc 28
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tattgccgctgcagcatcatcaagattc 29
|||||||| |||||||||||||||||||
Sbjct: 1 tattgccgatgcagcatcatcaagattc 28
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 107 tgtgaatcttgatgatgctccatccgcaaac 137
||||||||||||||||||| ||| |||||||
Sbjct: 78 tgtgaatcttgatgatgctacatgcgcaaac 108
>41050_ghr-MIR172:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 106 ttgtgaatcttgatgatgctccatccgcaaac 137
||||||||||||||||||||||| | ||||||
Sbjct: 39 ttgtgaatcttgatgatgctccaacagcaaac 8
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattc 29
|||||||| |||||||||||||| |||||
Sbjct: 119 ttattgccactgcagcatcatcaggattc 91
>40463_gma-MIR172f:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 107 tgtgaatcttgatgatgctccatccgc 133
||||||||||||||||||| |||||||
Sbjct: 27 tgtgaatcttgatgatgctacatccgc 1
>40067_ath-MIR172e:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tgcagcatcatcaagattcccac 33
|||||||||||||||||||||||
Sbjct: 114 tgcagcatcatcaagattcccac 92
>40065_ath-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 106 ttgtgaatcttgatgatgctcca 128
|||||||||||||||||||||||
Sbjct: 39 ttgtgaatcttgatgatgctcca 17
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 3 attgccgctgcagcatcatcaagattc 29
||||| |||||||||||||||||||||
Sbjct: 125 attgcagctgcagcatcatcaagattc 99
>39856_aly-MIR172e:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 11 tgcagcatcatcaagattcccac 33
|||||||||||||||||||||||
Sbjct: 117 tgcagcatcatcaagattcccac 95
>39854_aly-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 106 ttgtgaatcttgatgatgctcca 128
|||||||||||||||||||||||
Sbjct: 39 ttgtgaatcttgatgatgctcca 17
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 3 attgccgctgcagcatcatcaagattc 29
||||| |||||||||||||||||||||
Sbjct: 125 attgcagctgcagcatcatcaagattc 99
>39852_aly-MIR172a:mirbase
Length = 149
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 3 attgccgctgcagcatcatcaagattc 29
||||||| |||||||||||||||||||
Sbjct: 126 attgccgatgcagcatcatcaagattc 100
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 4 ttgccgctgcagcatcatcaagattc 29
|||||| |||||||||||||||||||
Sbjct: 125 ttgccgatgcagcatcatcaagattc 100
>41235_csi-MIR172c:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 gctgcagcatcatcaagattcc 30
||||||||||||||||||||||
Sbjct: 141 gctgcagcatcatcaagattcc 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 106 ttgtgaatcttgatgatgctccatccgcaaac 137
||||||||||||||| ||||||| | ||||||
Sbjct: 35 ttgtgaatcttgatggtgctccaactgcaaac 4
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tgcagcatcatcaagattccca 32
||||||||||||||||||||||
Sbjct: 105 tgcagcatcatcaagattccca 84
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tgcagcatcatcaagattccca 32
||||||||||||||||||||||
Sbjct: 142 tgcagcatcatcaagattccca 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 106 ttgtgaatcttgatgatgctccatccgcaaac 137
||||||||||||||||||| |||| ||||||
Sbjct: 44 ttgtgaatcttgatgatgccgcatctgcaaac 13
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 110 gaatcttgatgatgctccatccgcaaac 137
|||||||||||||||| |||| ||||||
Sbjct: 124 gaatcttgatgatgctgcatcagcaaac 151
>41990_osa-MIR172a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 110 gaatcttgatgatgctccatccgca 134
|||||||||||||||| ||||||||
Sbjct: 80 gaatcttgatgatgctgcatccgca 104
>41725_ata-MIR172:mirbase
Length = 277
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 110 gaatcttgatgatgctccatccgca 134
|||||||||||||||| ||||||||
Sbjct: 210 gaatcttgatgatgctgcatccgca 234
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 ttattgccgctgcagcatcatcaagattc 29
|||| |||| |||||||||||||||||||
Sbjct: 149 ttatggccgatgcagcatcatcaagattc 121
>42561_sbi-MIR172e:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 11 tgcagcatcatcaagattcccaca 34
||||||||||||||||||| ||||
Sbjct: 95 tgcagcatcatcaagattcacaca 72
>41993_osa-MIR172d:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 110 gaatcttgatgatgctccatccgcaaac 137
|||||||||||||||| |||| ||||||
Sbjct: 92 gaatcttgatgatgctgcatcagcaaac 119
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 107 tgtgaatcttgatgatgctccatc 130
||||||||||||||||||| ||||
Sbjct: 31 tgtgaatcttgatgatgctgcatc 8
>41233_csi-MIR172a:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 6 gccgctgcagcatcatcaagattc 29
|||| |||||||||||||||||||
Sbjct: 139 gccgttgcagcatcatcaagattc 116
>40702_mtr-MIR172:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 105 cttgtgaatcttgatgatgctcca 128
|||||||||| |||||||||||||
Sbjct: 29 cttgtgaatcctgatgatgctcca 6
>40063_ath-MIR172a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 6 gccgctgcagcatcatcaagattc 29
|||| |||||||||||||||||||
Sbjct: 102 gccgatgcagcatcatcaagattc 79
