miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41578_vvi-MIR162:mirbase
          Length = 103

 Score =  204 bits (103), Expect = 1e-53
 Identities = 103/103 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  tgaagtcactggatgcagcggttcatcgatctcttcctgaaattgttgtgaaaaaagcag 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgaagtcactggatgcagcggttcatcgatctcttcctgaaattgttgtgaaaaaagcag 60

                                                      
Query: 83  atcaagaatcggtcgataaacctctgcatccagcgttcactcc 125
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atcaagaatcggtcgataaacctctgcatccagcgttcactcc 103




>40329_cpa-MIR162a:mirbase
          Length = 109

 Score = 93.7 bits (47), Expect = 3e-20
 Identities = 87/98 (88%), Gaps = 3/98 (3%)
 Strand = Plus / Plus

                                                                       
Query: 25  aagtcactggatgcagcggttcatcgatctcttcct--gaaattgttgtgaaaaa-agca 81
           ||||||||||| ||||||||||||||||||||||||  ||| ||| |||||||||   ||
Sbjct: 7   aagtcactggaggcagcggttcatcgatctcttcctgggaatttggtgtgaaaaatcaca 66

                                                 
Query: 82  gatcaagaatcggtcgataaacctctgcatccagcgtt 119
           || || |||||| |||||||||||||||||||||||||
Sbjct: 67  gaacatgaatcgatcgataaacctctgcatccagcgtt 104




>40437_gma-MIR162:mirbase
          Length = 102

 Score = 85.7 bits (43), Expect = 8e-18
 Identities = 91/103 (88%), Gaps = 3/103 (2%)
 Strand = Plus / Plus

                                                                       
Query: 23  tgaagtcactggatgcagcggttcatcgatctcttcctgaaattgttgtgaaaaaagcag 82
           ||||||||||||||||||||||||||||||||||||||| ||| |||||   || | |||
Sbjct: 2   tgaagtcactggatgcagcggttcatcgatctcttcctg-aatcgttgt-ttaacatcag 59

                                                      
Query: 83  -atcaagaatcggtcgataaacctctgcatccagcgttcactc 124
            | || |||||| ||||||||||||||||||||||| ||||||
Sbjct: 60  aaccatgaatcgatcgataaacctctgcatccagcgctcactc 102




>40663_mtr-MIR162:mirbase
          Length = 124

 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                               
Query: 27 gtcactggatgcagcggttcatcgatctcttcctgaa 63
          |||||||||||||||||||||||||||| ||||||||
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctgaa 53



 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                               
Query: 88  gaatcggtcgataaacctctgcatccagcgttcact 123
           |||||||||||||||||||||||||||||| |||||
Sbjct: 80  gaatcggtcgataaacctctgcatccagcgctcact 115




>41046_ghr-MIR162a:mirbase
          Length = 148

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 80/95 (84%), Gaps = 6/95 (6%)
 Strand = Plus / Plus

                                                                       
Query: 29  cactggatgcagcggttcatcgatctcttcctgaaa---ttgttgtgaaaaaagcaga-- 83
           ||||||| |||||||||||||||||||||||||| |   ||||||||| || | || |  
Sbjct: 22  cactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaa 81

                                              
Query: 84  -tcaagaatcggtcgataaacctctgcatccagcg 117
             || |||||| |||||||||||||||||||||||
Sbjct: 82  tacatgaatcgatcgataaacctctgcatccagcg 116




>41313_ptc-MIR162a:mirbase
          Length = 107

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                
Query: 24 gaagtcactggatgcagcggttcatcgatctcttcctg 61
          |||| ||||||| |||||||||||||||||||||||||
Sbjct: 4  gaagacactggaggcagcggttcatcgatctcttcctg 41



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 95  tcgataaacctctgcatccagcg 117
           |||||||||||||||||||||||
Sbjct: 78  tcgataaacctctgcatccagcg 100




>41220_csi-MIR162:mirbase
          Length = 201

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 88  gaatcggtcgataaacctctgcatccagcgttcactcc 125
           |||||| ||||||||||||||||||||||| |||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccagcgctcactcc 191




>40342_rco-MIR162:mirbase
          Length = 101

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 28 tcactggatgcagcggttcatcgatctcttcctg 61
          |||||||| |||||||||||||||||||||||||
Sbjct: 1  tcactggaggcagcggttcatcgatctcttcctg 34




>41090_tcc-MIR162:mirbase
          Length = 131

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 29 cactggatgcagcggttcatcgatctcttcctg 61
          ||||||| |||||||||||||||||||||||||
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctg 51



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  tcgataaacctctgcatccag 115
           |||||||||||||||||||||
Sbjct: 91  tcgataaacctctgcatccag 111




>40025_ath-MIR162b:mirbase
          Length = 111

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 85  caagaatcggtcgataaacctctgcatccagcg 117
           ||||||||| |||||||||||||||||||||||
Sbjct: 69  caagaatcgatcgataaacctctgcatccagcg 101



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 23 tgaagtcactggatgcagcggttcatcgatc 53
          ||||||| ||||| |||||||||||||||||
Sbjct: 4  tgaagtcgctggaggcagcggttcatcgatc 34




>42708_zma-MIR162:mirbase
          Length = 130

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcggtcgataaacctctgcatccag 115
           ||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130




>41530_sly-MIR162:mirbase
          Length = 99

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcggtcgataaacctctgcatccag 115
           ||||||||||||||||||||||||||||
Sbjct: 72  gaatcggtcgataaacctctgcatccag 99




>41315_ptc-MIR162c:mirbase
          Length = 107

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                  
Query: 24 gaagtcactggatgcagcggttcatcgatctcttcctgaa 63
          |||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 4  gaagacactggaggcagcggttcatcgatcttttcctgaa 43



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  tcgataaacctctgcatccag 115
           |||||||||||||||||||||
Sbjct: 78  tcgataaacctctgcatccag 98




>41314_ptc-MIR162b:mirbase
          Length = 107

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                  
Query: 24 gaagtcactggatgcagcggttcatcgatctcttcctgaa 63
          |||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 4  gaagacactggaggcagcggttcatcgatcttttcctgaa 43



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  tcgataaacctctgcatccag 115
           |||||||||||||||||||||
Sbjct: 78  tcgataaacctctgcatccag 98




>40024_ath-MIR162a:mirbase
          Length = 140

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 26 agtcactggatgcagcggttcatcgatctcttcctg 61
          |||| ||||| |||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 95  tcgataaacctctgcatccagcgtt 119
           |||||||||||||||||||||||||
Sbjct: 89  tcgataaacctctgcatccagcgtt 113




>39812_aly-MIR162a:mirbase
          Length = 228

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 26 agtcactggatgcagcggttcatcgatctcttcctg 61
          |||| ||||| |||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 95  tcgataaacctctgcatccagcgtt 119
           |||||||||||||||||||||||||
Sbjct: 136 tcgataaacctctgcatccagcgtt 160




>39813_aly-MIR162b:mirbase
          Length = 184

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 88  gaatcggtcgataaacctctgcatccagcg 117
           |||||| |||||||||||||||||||||||
Sbjct: 106 gaatcgatcgataaacctctgcatccagcg 135



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 23 tgaagtcactggatgcagcggttcatcgatc 53
          ||||||| ||||| |||||||||||||||||
Sbjct: 42 tgaagtcgctggaggcagcggttcatcgatc 72




>42502_sbi-MIR162:mirbase
          Length = 127

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcggtcgataaacctctgcatccag 115
           |||||| |||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127




>41929_osa-MIR162a:mirbase
          Length = 171

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcggtcgataaacctctgcatccag 115
           |||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163




>41736_bdi-MIR162:mirbase
          Length = 133

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 88  gaatcggtcgataaacctctgcatcc 113
           |||||| |||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129




>41930_osa-MIR162b:mirbase
          Length = 134

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 88  gaatcggtcgataaacctctgcatccag 115
           |||||| ||||||| |||||||||||||
Sbjct: 97  gaatcgatcgataagcctctgcatccag 124