miRNEST 2.0, an integrative microRNA resource :: BLAST
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 361 bits (182), Expect = e-100
Identities = 189/190 (99%), Gaps = 1/190 (0%)
Strand = Plus / Plus
Query: 4 ttttggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctg 60
Query: 64 acttatggatcccacagccctatcccgtcaat-gggggcattggataggcttgtggcttg 122
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 acttatggatcccacagccctatcccgtcaatggggggcattggataggcttgtggcttg 120
Query: 123 catatctcaggagctgcattatccaagtttagatccttgtttggattgaagggagctcta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catatctcaggagctgcattatccaagtttagatccttgtttggattgaagggagctcta 180
Query: 183 cacctctctc 192
||||||||||
Sbjct: 181 cacctctctc 190
>40338_rco-MIR159:mirbase
Length = 180
Score = 139 bits (70), Expect = 9e-34
Identities = 154/178 (86%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 9 gagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactta 68
||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
Query: 69 tggatcccacagccctat-cccgtcaatgggggcattggataggcttgtggcttgcatat 127
|||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 61 tggatcccacagccctataagcagagattataattttggataggcttgtggcttgcatat 120
Query: 128 ctcaggagctgcattatccaagt-ttagatccttgtttggattgaagggagctctaca 184
|||||||||| ||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcaggagcttcatta-ccttgtattagatccttgtttggattgaagggagctctaca 177
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 109 bits (55), Expect = 8e-25
Identities = 153/183 (83%), Gaps = 7/183 (3%)
Strand = Plus / Plus
Query: 7 tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 66
||||||||||||||||||||||||||||| | || | |||||||||| ||||||||||
Sbjct: 6 tggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagc 65
Query: 67 tatggatcccacagccctatc-ccgtcaatgggggca-ttggataggcttgtggcttgca 124
|||| |||||||||||||||| || ||| | || || ||| ||| || ||||||||
Sbjct: 66 tatgaatcccacagccctatcaccatca-----gtcattttgatgggcctgcggcttgca 120
Query: 125 tatctcaggagctgcattatccaagtttagatccttgtttggattgaagggagctctaca 184
||||||||||||| |||| | || ||||||| || ||||||||||||||||||||| |
Sbjct: 121 tatctcaggagctttattacctaatgttagatctttttttggattgaagggagctctaaa 180
Query: 185 cct 187
|||
Sbjct: 181 cct 183
>40397_ahy-MIR159:mirbase
Length = 197
Score = 93.7 bits (47), Expect = 5e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 10 agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 69
|||||||||||||||||||||| |||||||||| |||||||||||||||||| | |||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
Query: 70 ggatcccacag 80
|||||||||||
Sbjct: 61 ggatcccacag 71
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 153 agatccttgtttggattgaagggagctctaca 184
|||||||| |||||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctctaca 179
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 91.7 bits (46), Expect = 2e-19
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 70
|||||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 71 gatcccacag 80
||||||||||
Sbjct: 61 gatcccacag 70
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 155 atccttgtttggattgaagggagctctac 183
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 91.7 bits (46), Expect = 2e-19
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 11 gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 70
|||||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 71 gatcccacag 80
||||||||||
Sbjct: 61 gatcccacag 70
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 155 atccttgtttggattgaagggagctctac 183
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactt 67
|||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| | |
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 68 atggatcc 75
||||||||
Sbjct: 67 atggatcc 74
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactt 67
|||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| | |
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 68 atggatcc 75
||||||||
Sbjct: 67 atggatcc 74
>40432_gma-MIR159a:mirbase
Length = 214
Score = 85.7 bits (43), Expect = 1e-17
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 10 agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 69
||||||||||||||||||||||| |||| ||||||||||| ||||||||||| | |||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
Query: 70 ggatcccacag 80
|||||||||||
Sbjct: 79 ggatcccacag 89
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 157 ccttgtttggattgaagggagctctacacc 186
|||| |||||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctacacc 199
>41218_csi-MIR159:mirbase
Length = 216
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 8 ggagtggagctccttgaagtccaatagagggtcttac-tgggtagattgagctgctgact 66
|||||||||||||||||||||||| ||||| ||| | ||||| |||||||||||||
Sbjct: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
Query: 67 tatggatcccacagccctat 86
|||||||||||||| |||||
Sbjct: 68 tatggatcccacagtcctat 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gataggcttgtggcttgcatat 127
||||||||||||||||||||||
Sbjct: 125 gataggcttgtggcttgcatat 146
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctac 183
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>41922_osa-MIR159f:mirbase
Length = 188
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 163 ttggattgaagggagctctacacctctctc 192
||||||||||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctacacctctctc 188
>41528_sly-MIR159:mirbase
Length = 177
Score = 56.0 bits (28), Expect = 1e-08
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 12 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 71
|||||||||||||||||||| | | ||| || || || |||||||||||||| |||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 72 atcccacagccctatc 87
|| || ||||||||||
Sbjct: 61 attcctcagccctatc 76
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctcta 182
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctaca 184
|||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctaca 174
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctaca 184
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctaca 184
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctaca 184
|||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctaca 205
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 116 tggcttgcatatctcaggagct 137
||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagct 151
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tgtttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tgtttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tgtttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tgtttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41919_osa-MIR159c:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 163 ttggattgaagggagctctacacctctctc 192
|||||||||||||||||| ||| |||||||
Sbjct: 168 ttggattgaagggagctccacatctctctc 197
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tgtttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tgtttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctac 183
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
