miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40846_mtr-MIR2610a:mirbase
Length = 412
Score = 387 bits (195), Expect = e-108
Identities = 359/411 (87%), Gaps = 2/411 (0%)
Strand = Plus / Plus
Query: 21 aagattgagacttgtatggcttcgttgaaagacgcctagagggtaattcaggaaggcaaa 80
||||||||||||||||||||||||||||| || ||| ||| ||||||||||||||||||
Sbjct: 1 aagattgagacttgtatggcttcgttgaaggatgcccggagagtaattcaggaaggcaaa 60
Query: 81 accgaaggctgaggtcagctagtggagtaac-atagaacaaacgcaaagagggaattggt 139
||||||||||| |||||||||||||||| | | | ||||| || || ||||||||||||
Sbjct: 61 accgaaggctggggtcagctagtggagttgccagaaaacaagcgtaaggagggaattggt 120
Query: 140 tttcctaacagcaagcctaggatgttcgaccctaccaaaggctcattccacagtgccgga 199
|| | |||||| |||||| |||||||||||||||||| ||| || ||||||||||| ||
Sbjct: 121 ttccttaacagtaagcctgggatgttcgaccctaccagaggttctttccacagtgctggt 180
Query: 200 ttcatccatgattcgccagagaccaatggaattacagacgatgcacctgaaggtgtggca 259
||||| |||||||| ||||||||||||| |||| ||| |||||||||| ||| ||| ||
Sbjct: 181 ttcattcatgattcaccagagaccaatgcaattttagatgatgcacctggaggagtgaca 240
Query: 260 cctatctttgtgacacctggaggagcctgctgcaactagattgtggtagacattccttct 319
|| |||||||||| ||||||||||| |||||||||| ||||| || ||||||||||||
Sbjct: 241 ccggtctttgtgacgcctggaggagcttgctgcaactggattgctgttgacattccttct 300
Query: 320 gcgataccccgttctaattaatatgttggtcttgtcttttg-tcttttttgcttttaaga 378
| || |||| | ||||| |||| |||| ||||||||||||| | ||||||| ||||||||
Sbjct: 301 gtgacaccctgctctaagtaatgtgtttgtcttgtcttttgttgttttttgtttttaaga 360
Query: 379 aaactcctttcgtcctgcccaagacgaaagtgaaatcatgtagggctttgt 429
||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 361 aaactcctttcgttctgcccaaggcgaaagtgaaatcatgtagggctttgt 411
>40847_mtr-MIR2610b:mirbase
Length = 412
Score = 363 bits (183), Expect = e-101
Identities = 356/411 (86%), Gaps = 2/411 (0%)
Strand = Plus / Plus
Query: 21 aagattgagacttgtatggcttcgttgaaagacgcctagagggtaattcaggaaggcaaa 80
||||||||||||||||||||||||||||| || ||| ||| ||||||||||||||||||
Sbjct: 1 aagattgagacttgtatggcttcgttgaaggatgcccggagagtaattcaggaaggcaaa 60
Query: 81 accgaaggctgaggtcagctagtggagtaac-atagaacaaacgcaaagagggaattggt 139
||||||||||| |||||||||||||||| | | | ||||| || || ||||||||||||
Sbjct: 61 accgaaggctggggtcagctagtggagttgccagaaaacaagcgtaaggagggaattggt 120
Query: 140 tttcctaacagcaagcctaggatgttcgaccctaccaaaggctcattccacagtgccgga 199
|| | | |||| |||||| |||||||||||||||||| ||| || ||||||||||| ||
Sbjct: 121 ttccttgacagtaagcctgggatgttcgaccctaccagaggttctttccacagtgctggt 180
Query: 200 ttcatccatgattcgccagagaccaatggaattacagacgatgcacctgaaggtgtggca 259
||||| |||||||| ||||||||||||| |||| ||| |||||||||| ||| ||| ||
Sbjct: 181 ttcattcatgattcaccagagaccaatgcaattttagatgatgcacctggaggagtgaca 240
Query: 260 cctatctttgtgacacctggaggagcctgctgcaactagattgtggtagacattccttct 319
|| |||||||||| ||||||||||| |||||||||| ||||| || ||||||||||||
Sbjct: 241 ccggtctttgtgacgcctggaggagcttgctgcaactggattgctgttgacattccttct 300
Query: 320 gcgataccccgttctaattaatatgttggtcttgtcttttg-tcttttttgcttttaaga 378
| || |||| | ||||| |||| |||| ||||||| ||||| | ||||||| ||||||||
Sbjct: 301 gtgacaccctgctctaagtaatgtgtttgtcttgttttttgttgttttttgtttttaaga 360
Query: 379 aaactcctttcgtcctgcccaagacgaaagtgaaatcatgtagggctttgt 429
|||||||||| || ||||||||| |||||||||||||||||||||||||||
Sbjct: 361 aaactcctttagttctgcccaaggcgaaagtgaaatcatgtagggctttgt 411
