miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40791_mtr-MIR2587f:mirbase
Length = 105
Score = 168 bits (85), Expect = 5e-43
Identities = 97/101 (96%)
Strand = Plus / Plus
Query: 4 gtggtgtcatggtcattgttgaccattcatatgaaccctgcaattgcattgcagcttgtg 63
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 3 gtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtg 62
Query: 64 tggggttcatataatggtcaacagagacccttgacatcaaa 104
|||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 63 tggggttcatataacggtcaacagagactcttgacatcaaa 103
>40790_mtr-MIR2587e:mirbase
Length = 105
Score = 168 bits (85), Expect = 5e-43
Identities = 97/101 (96%)
Strand = Plus / Plus
Query: 4 gtggtgtcatggtcattgttgaccattcatatgaaccctgcaattgcattgcagcttgtg 63
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 3 gtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtg 62
Query: 64 tggggttcatataatggtcaacagagacccttgacatcaaa 104
|||||||||||||| |||||||||||||| |||||||||||
Sbjct: 63 tggggttcatataacggtcaacagagaccattgacatcaaa 103
>40789_mtr-MIR2587d:mirbase
Length = 115
Score = 153 bits (77), Expect = 3e-38
Identities = 92/97 (94%)
Strand = Plus / Plus
Query: 4 gtggtgtcatggtcattgttgaccattcatatgaaccctgcaattgcattgcagcttgtg 63
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 3 gtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtg 62
Query: 64 tggggttcatataatggtcaacagagacccttgacat 100
|||||||||||||| |||||||| ||||| |||||||
Sbjct: 63 tggggttcatataacggtcaacatagaccattgacat 99
>40787_mtr-MIR2587b:mirbase
Length = 98
Score = 137 bits (69), Expect = 2e-33
Identities = 90/97 (92%)
Strand = Plus / Plus
Query: 6 ggtgtcatggtcattgttgaccattcatatgaaccctgcaattgcattgcagcttgtgtg 65
|||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 2 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaataacattgcaacttgtgtg 61
Query: 66 gggttcatataatggtcaacagagacccttgacatca 102
|||||||||||| ||||||| |||||| |||||||||
Sbjct: 62 gggttcatataacggtcaactgagacctttgacatca 98
>40788_mtr-MIR2587c:mirbase
Length = 110
Score = 121 bits (61), Expect = 1e-28
Identities = 91/101 (90%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 5 tggtgtcatggtcattgttgaccattcatatgaaccctgcaattgcattgc-----agct 59
||||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaact 63
Query: 60 tgtgtggggttcatataatggtcaacagagacccttgacat 100
|||||||||||||||||| |||||| |||||||||||||||
Sbjct: 64 tgtgtggggttcatataacggtcaatagagacccttgacat 104
>40786_mtr-MIR2587a:mirbase
Length = 110
Score = 121 bits (61), Expect = 1e-28
Identities = 91/101 (90%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 5 tggtgtcatggtcattgttgaccattcatatgaaccctgcaattgcattgc-----agct 59
||||||||||||||||||||||| ||||||||||||||||||||||| ||| | ||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaact 63
Query: 60 tgtgtggggttcatataatggtcaacagagacccttgacat 100
|||||||||||||||||| |||||| |||||||||||||||
Sbjct: 64 tgtgtggggttcatataacggtcaatagagacccttgacat 104
