miRNEST 2.0, an integrative microRNA resource :: BLAST
>29129_hsa-mir-1273g:mirbase
Length = 100
Score = 71.9 bits (36), Expect = 3e-13
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 94 aggtgggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgactgcaccac 153
|||||||||||||||||||| | ||| ||| |||||||||| || | ||| |||||
Sbjct: 2 aggtgggaggattgcttgagtcagggtggttgaggctgcagtaagttgtgatcataccac 61
Query: 154 tgcactccagcctgggagacagagcaagaccctgtc 189
|||||||||||||| | |||||||||||||| ||||
Sbjct: 62 tgcactccagcctgagtgacagagcaagaccttgtc 97
>30688_ptr-mir-1273:mirbase
Length = 102
Score = 71.9 bits (36), Expect = 3e-13
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 104 attgcttgagcctgggaggtcaaggctgcagtgagctatgactgcaccactgcactccag 163
||||||||| |||||| ||| ||| |||||||||| | || ||| ||||||||||||||
Sbjct: 13 attgcttgaacctgggtggtggaggttgcagtgagccaagattgcgccactgcactccag 72
Query: 164 cctgggagacagagcaagac 183
|||||| |||| ||||||||
Sbjct: 73 cctgggcgacaaagcaagac 92
>29124_hsa-mir-1273:mirbase
Length = 103
Score = 65.9 bits (33), Expect = 2e-11
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 99 ggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgactgcaccactgcac 158
|||| ||||||||| || ||| ||| ||| |||||||||| | || ||| |||||||||
Sbjct: 8 ggagaattgcttgaacccgggtggtggaggttgcagtgagccaagattgcgccactgcac 67
Query: 159 tccagcctgggagacagagcaagac 183
||||||||||| |||| ||||||||
Sbjct: 68 tccagcctgggcgacaaagcaagac 92
>31332_ppy-mir-1273:mirbase
Length = 103
Score = 65.9 bits (33), Expect = 2e-11
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 99 ggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgactgcaccactgcac 158
|||| ||||||||| || ||||||| ||| |||||||||| | || | |||||||||
Sbjct: 8 ggagaattgcttgaacccgggaggtggaggttgcagtgagccaagatcacgccactgcac 67
Query: 159 tccagcctgggagacagagcaagac 183
||||||||||| |||||||||||||
Sbjct: 68 tccagcctgggtgacagagcaagac 92
>29128_hsa-mir-1273f:mirbase
Length = 99
Score = 61.9 bits (31), Expect = 3e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 94 aggtgggaggattgcttgagcctgggaggtcaaggctgcagtgagct 140
|||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 1 aggtgggaggattgcttgagcctgggagatggaggttgcagtgagct 47
>29099_hsa-mir-1254:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 2e-08
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 95 ggtgggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgactgcaccact 154
|||||||||||||||||||||||| || | || ||||||||| |||| | || |||||
Sbjct: 1 ggtgggaggattgcttgagcctggaagctggagcctgcagtgaactatcattgtgccact 60
Query: 155 gcactccagcct 166
| ||||||||||
Sbjct: 61 gtactccagcct 72
>29505_hsa-mir-3929:mirbase
Length = 55
Score = 56.0 bits (28), Expect = 2e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 243 agtggctcacacctgtaatcctagcactttgggagg 278
||||||||||||| ||||||| ||||||||||||||
Sbjct: 1 agtggctcacaccagtaatcccagcactttgggagg 36
>31314_ppy-mir-1254:mirbase
Length = 97
Score = 56.0 bits (28), Expect = 2e-08
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 95 ggtgggaggattgcttgagcctgggaggtcaaggctgcagtgagctatgactgcaccact 154
||||||||||||||||||| |||| || | || ||||||||| |||| | || |||||
Sbjct: 1 ggtgggaggattgcttgagtctggaagctggagcctgcagtgaactatcattgtgccact 60
Query: 155 gcactccagcct 166
||||||||||||
Sbjct: 61 gcactccagcct 72
>29269_hsa-mir-3135:mirbase
Length = 77
Score = 48.1 bits (24), Expect = 5e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 118 ggaggtcaaggctgcagtgagctatgactgcaccactgca 157
|||||||||||||||||||| || || ||||||||||||
Sbjct: 64 ggaggtcaaggctgcagtgaactgagattgcaccactgca 25
>30676_ptr-mir-1254:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 96 gtgggaggattgcttgagcctgg 118
|||||||||||||||||||||||
Sbjct: 1 gtgggaggattgcttgagcctgg 23
>28935_hsa-mir-619:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 8e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 241 gcagtggctcacacctgtaatcctagcactttgggagg 278
||||||||||| |||||||||| |||| |||||||||
Sbjct: 50 gcagtggctcatgcctgtaatcccagcattttgggagg 13
>29141_hsa-mir-1285-1:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 8e-05
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 303 ccaggagttcaagactagcctgggcaacatagggagacccaatctctaca 352
||||||||| |||| ||||||||||||| || |||| || |||||||||
Sbjct: 50 ccaggagtttgagaccagcctgggcaacaaagtgagatcctatctctaca 1
>29270_hsa-mir-3135b:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 8e-05
Identities = 35/39 (89%), Gaps = 4/39 (10%)
Strand = Plus / Minus
Query: 126 aggctgcagtgagcta----tgactgcaccactgcactc 160
|||||||||||||||| |||||||||||||||||||
Sbjct: 54 aggctgcagtgagctaggactgactgcaccactgcactc 16
>30698_ptr-mir-1285:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 8e-05
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 303 ccaggagttcaagactagcctgggcaacatagggagacccaatctctaca 352
||||||||| |||| ||||||||||||| || |||| || |||||||||
Sbjct: 50 ccaggagtttgagaccagcctgggcaacaaagtgagatcctatctctaca 1
>31341_ppy-mir-1285a:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 8e-05
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 303 ccaggagttcaagactagcctgggcaacatagggagacccaatctctaca 352
||||||||| |||| ||||||||||| | || ||||||| |||||||||
Sbjct: 50 ccaggagtttgagaccagcctgggcaataaagtgagaccctatctctaca 1
>29310_hsa-mir-3159:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 3e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 242 cagtggctcacacctgtaatcctagcactttgg 274
||||||||||| |||||||||| |||| |||||
Sbjct: 42 cagtggctcacgcctgtaatcccagcattttgg 74
