miRNEST 2.0, an integrative microRNA resource :: BLAST
>41027_pvu-MIR399a:mirbase
Length = 223
Score = 111 bits (56), Expect = 2e-25
Identities = 99/112 (88%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 26 taagcaaatcagctatagggcttctctttcttggcaggaaattatcatgaccattccatc 85
|||||||| ||| |||||||||||||||| |||||||||||| | |||||||| | |||
Sbjct: 22 taagcaaaccagttatagggcttctctttgttggcaggaaatga-catgaccacttcatg 80
Query: 86 atgtgtcttgccaaaggagagttgccctgttgctgttttagcttaatgtgta 137
| | |||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 81 aaatatcttgccaaaggagagttgccctgttgctgctttagcttaatatgta 132
>41669_vvi-MIR399b:mirbase
Length = 117
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 86 atgtgtcttgccaaaggagagttgccctgt 115
||||| ||||||||||||||||||||||||
Sbjct: 79 atgtgacttgccaaaggagagttgccctgt 108
>41456_ptc-MIR399i:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 88 gtgtcttgccaaaggagagttgccct 113
||||||||||||||||||||||||||
Sbjct: 73 gtgtcttgccaaaggagagttgccct 98
>41154_tcc-MIR399i:mirbase
Length = 157
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 cttgccaaaggagagttgccctgt 115
||||||||||||||||||||||||
Sbjct: 115 cttgccaaaggagagttgccctgt 138
>40746_mtr-MIR399p:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 cttgccaaaggagagttgccctgt 115
||||||||||||||||||||||||
Sbjct: 52 cttgccaaaggagagttgccctgt 75
>40742_mtr-MIR399l:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 cttgccaaaggagagttgccctgt 115
||||||||||||||||||||||||
Sbjct: 52 cttgccaaaggagagttgccctgt 75
>40383_rco-MIR399a:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 cttgccaaaggagagttgccctgt 115
||||||||||||||||||||||||
Sbjct: 66 cttgccaaaggagagttgccctgt 89
>40094_ath-MIR399c:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 cttgccaaaggagagttgccctgt 115
||||||||||||||||||||||||
Sbjct: 82 cttgccaaaggagagttgccctgt 105
>39886_aly-MIR399c:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 cttgccaaaggagagttgccctgt 115
||||||||||||||||||||||||
Sbjct: 87 cttgccaaaggagagttgccctgt 110
>42823_zma-MIR399e:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 agggcttctctttcttggcagg 63
||||||||||||||||||||||
Sbjct: 22 agggcttctctttcttggcagg 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccctgt 115
||||||||||||||||||||||
Sbjct: 85 tgccaaaggagagttgccctgt 106
>42597_sbi-MIR399i:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 42 agggcttctctttcttggcagg 63
||||||||||||||||||||||
Sbjct: 22 agggcttctctttcttggcagg 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccctgt 115
||||||||||||||||||||||
Sbjct: 82 tgccaaaggagagttgccctgt 103
>41670_vvi-MIR399c:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccctgt 115
||||||||||||||||||||||
Sbjct: 52 tgccaaaggagagttgccctgt 73
>41249_csi-MIR399d:mirbase
Length = 130
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccctgt 115
||||||||||||||||||||||
Sbjct: 100 tgccaaaggagagttgccctgt 121
>42828_zma-MIR399j:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccctg 114
|||||||||||||||||||||
Sbjct: 154 tgccaaaggagagttgccctg 174
>42827_zma-MIR399i:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccctg 114
|||||||||||||||||||||
Sbjct: 70 tgccaaaggagagttgccctg 90
>42592_sbi-MIR399d:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccctg 114
|||||||||||||||||||||
Sbjct: 166 tgccaaaggagagttgccctg 186
>42044_osa-MIR399d:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccctg 114
|||||||||||||||||||||
Sbjct: 256 tgccaaaggagagttgccctg 276
>41676_vvi-MIR399i:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 95 gccaaaggagagttgccctgt 115
|||||||||||||||||||||
Sbjct: 93 gccaaaggagagttgccctgt 113
>41146_tcc-MIR399a:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 95 gccaaaggagagttgccctgt 115
|||||||||||||||||||||
Sbjct: 97 gccaaaggagagttgccctgt 117
>40093_ath-MIR399b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccctg 114
|||||||||||||||||||||
Sbjct: 105 tgccaaaggagagttgccctg 125
>39885_aly-MIR399b:mirbase
Length = 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccctg 114
|||||||||||||||||||||
Sbjct: 106 tgccaaaggagagttgccctg 126
>42050_osa-MIR399j:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccct 113
||||||||||||||||||||
Sbjct: 76 tgccaaaggagagttgccct 95
>41548_sly-MIR399:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccct 113
||||||||||||||||||||
Sbjct: 51 tgccaaaggagagttgccct 70
>41455_ptc-MIR399h:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 92 cttgccaaaggagagttgccctgt 115
||||||||||||||||| ||||||
Sbjct: 101 cttgccaaaggagagtttccctgt 124
>41247_csi-MIR399b:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccct 113
||||||||||||||||||||
Sbjct: 125 tgccaaaggagagttgccct 144
>41192_aqc-MIR399:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tgccaaaggagagttgccct 113
||||||||||||||||||||
Sbjct: 72 tgccaaaggagagttgccct 91
>40732_mtr-MIR399b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 92 cttgccaaaggagagttgccctgt 115
||||||||||||||| ||||||||
Sbjct: 71 cttgccaaaggagagctgccctgt 94
>40386_rco-MIR399d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 92 cttgccaaaggagagttgccctgt 115
||||||||||||||| ||||||||
Sbjct: 76 cttgccaaaggagagctgccctgt 99
