miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 238 bits (120), Expect = 8e-64
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 7 ggttgttgacagaagatagagggcactaaggatgatatgcatacacatatatatacaaca 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttgttgacagaagatagagggcactaaggatgatatgcatacacatatatatacaaca 60
Query: 67 tggaggaggagcttaattgcatttcatttcctttgtgctctctagacttctgtcatcacc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggaggaggagcttaattgcatttcatttcctttgtgctctctagacttctgtcatcacc 120
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacctca 129
|||||||||||||||||||||||||||||||||||
Sbjct: 64 tcctttgtgctctctagacttctgtcatcacctca 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcac 32
|||||||||||||||||||| ||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
>39800_aly-MIR157c:mirbase
Length = 293
Score = 69.9 bits (35), Expect = 4e-13
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 7 ggttgttgacagaagatagagggcactaaggatgatatgcatacacatatatata 61
||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 50 ggttgttgacagaagatagagagcactaaggatgacatgcaagcacatacatata 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 98 tttgtgctctctagacttctgtcatcacct 127
||||||||||||| |||||||||| |||||
Sbjct: 216 tttgtgctctctatacttctgtcaccacct 245
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 67.9 bits (34), Expect = 2e-12
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 74 ggagcttaattgcatttcatttcctttgtgctctctagacttctgtcatcacct 127
||||||||||||||| ||| | |||||||||||||||| |||||||||||||||
Sbjct: 48 ggagcttaattgcatctcact-cctttgtgctctctagtcttctgtcatcacct 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 10 tgttgacagaagatagagggcactaaggatgatatgcat 48
|||||||||||||||||| ||||| | ||||| ||||||
Sbjct: 9 tgttgacagaagatagagagcactgacgatgaaatgcat 47
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 67.9 bits (34), Expect = 2e-12
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 74 ggagcttaattgcatttcatttcctttgtgctctctagacttctgtcatcacct 127
||||||||||||||| ||| | |||||||||||||||| |||||||||||||||
Sbjct: 48 ggagcttaattgcatctcact-cctttgtgctctctagtcttctgtcatcacct 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcac 32
|||||||||||||||||||| ||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcactaaggatgatatgcatacacatatatata 61
|||||||||||||||||||| |||| || ||||||||||||| | |||||||||
Sbjct: 19 gttgttgacagaagatagagagcacaaaagatgatatgcatatagatatatata 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 94 ttcctttgtgctctctagacttctgtcatcac 125
||||||||||||||||| |||||||||||||
Sbjct: 85 ttcctttgtgctctctaagcttctgtcatcac 116
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcactaaggatgatatgcatacacatatatata 61
|||||||||||||||||||| |||| || ||||||||||||| | |||||||||
Sbjct: 19 gttgttgacagaagatagagagcacaaaagatgatatgcatatagatatatata 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 94 ttcctttgtgctctctagacttctgtcatcac 125
||||||||||||||||| |||||||||||||
Sbjct: 85 ttcctttgtgctctctaagcttctgtcatcac 116
>40260_bna-MIR156c:mirbase
Length = 155
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 6 aggttgttgacagaagatagagggcactaaggatgatatgca 47
|||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 12 aggttgttgacagaagatagagagcactaaggatgacatgca 53
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 tttgtgctctctagacttctgtca 121
||||||||||||| ||||||||||
Sbjct: 114 tttgtgctctctatacttctgtca 137
>40310_bra-MIR157a:mirbase
Length = 149
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 7 ggttgttgacagaagatagagggcactaaggatgatatgca 47
||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 9 ggttgttgacagaagatagagagcactaaggatgacatgca 49
>40304_bol-MIR157a:mirbase
Length = 106
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 7 ggttgttgacagaagatagagggcactaaggatgatatgca 47
||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1 ggttgttgacagaagatagagagcactaaggatgacatgca 41
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 tttgtgctctctagacttctgtca 121
||||||||||||| ||||||||||
Sbjct: 78 tttgtgctctctatacttctgtca 101
>40259_bna-MIR156b:mirbase
Length = 208
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 7 ggttgttgacagaagatagagggcactaaggatgatatgca 47
||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 20 ggttgttgacagaagatagagagcactaaggatgacatgca 60
>40012_ath-MIR157c:mirbase
Length = 217
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 7 ggttgttgacagaagatagagggcactaaggatgatatgca 47
||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 19 ggttgttgacagaagatagagagcactaaggatgacatgca 59
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 98 tttgtgctctctagacttctgtcatcacct 127
||||||||||||| |||||||||| |||||
Sbjct: 165 tttgtgctctctatacttctgtcaccacct 194
>39801_aly-MIR157d:mirbase
Length = 256
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 7 ggttgttgacagaagatagagggcactaaggatgatatgca 47
||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 32 ggttgctgacagaagatagagagcactaaggatgatatgca 72
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 94 ttcctttgtgctctctagacttctgtcatcacct 127
||||| ||||||||||| |||||||||||||||
Sbjct: 184 ttcctatgtgctctctatgcttctgtcatcacct 217
>40428_gma-MIR156d:mirbase
Length = 151
Score = 60.0 bits (30), Expect = 4e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 4 taaggttgttgacagaagatagagggcactaaggatgatatgcata 49
|||||||||||||||||||||||| |||| | |||||||||||||
Sbjct: 13 taaggttgttgacagaagatagagagcacagatgatgatatgcata 58
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacct 127
|||||||||||||||| ||||||||||||||||
Sbjct: 105 tcctttgtgctctctatacttctgtcatcacct 137
>40013_ath-MIR157d:mirbase
Length = 221
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 7 ggttgttgacagaagatagagggcactaaggatgatatgca 47
||||| ||||||||||||||| |||||||||||| ||||||
Sbjct: 18 ggttgctgacagaagatagagagcactaaggatgctatgca 58
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 94 ttcctttgtgctctctagacttctgtcatcacct 127
||||| ||||||||||| |||||||||||||||
Sbjct: 166 ttcctatgtgctctctatgcttctgtcatcacct 199
>39798_aly-MIR157a:mirbase
Length = 123
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacct 127
||||||||||||||||| |||||||||||||||
Sbjct: 79 tcctttgtgctctctagccttctgtcatcacct 111
>40011_ath-MIR157b:mirbase
Length = 132
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacc 126
||||||||||||||||| ||||||||||||||
Sbjct: 82 tcctttgtgctctctagccttctgtcatcacc 113
>40010_ath-MIR157a:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacc 126
||||||||||||||||| ||||||||||||||
Sbjct: 67 tcctttgtgctctctagccttctgtcatcacc 98
>41525_sly-MIR156a:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 12 ttgacagaagatagagggcactaaggatgatatgc 46
|||||||||||||||| ||||||| ||||||||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgc 35
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 54.0 bits (27), Expect = 3e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 7 ggttgttgacagaagatagagggcactaaggatgatatgcatacacatatatata 61
||||||||||||||||||||| |||| | |||||||||||| | |||||||||
Sbjct: 1 ggttgttgacagaagatagagagcacagatgatgatatgcatttatatatatata 55
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacc 126
|||||||||||||||| ||||||||||||||
Sbjct: 141 tcctttgtgctctctatgcttctgtcatcacc 172
>40429_gma-MIR156e:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatca 124
||||||||||||||||| ||||||||||||
Sbjct: 78 tcctttgtgctctctagtcttctgtcatca 107
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 10 tgttgacagaagatagagggcactaaggatgatatgcat 48
|||||||||||||||||| ||||| | ||||| ||||||
Sbjct: 19 tgttgacagaagatagagagcactgatgatgaaatgcat 57
>40336_rco-MIR156g:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatca 124
||||||||||||||||| ||||||||||||
Sbjct: 63 tcctttgtgctctctagtcttctgtcatca 92
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcactaaggatgatatgcat 48
|||||||||||||||||||| ||||| | ||||| ||||||
Sbjct: 2 gttgttgacagaagatagagagcactgacgatgaaatgcat 42
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacct 127
|||||||||||||||| |||||||||||||||
Sbjct: 64 tcctttgtgctctctattcttctgtcatcacct 96
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcac 32
|||||||||||||||||||| ||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacct 127
|||||||||||||||| |||||||||||||||
Sbjct: 74 tcctttgtgctctctattcttctgtcatcacct 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcac 32
|||||||||||||||||||| ||||
Sbjct: 17 gttgttgacagaagatagagagcac 41
>40337_rco-MIR156h:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacct 127
|||||||||||||||| |||||||||||||||
Sbjct: 63 tcctttgtgctctctatgcttctgtcatcacct 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcac 32
|||||||||||||||||||| ||||
Sbjct: 2 gttgttgacagaagatagagagcac 26
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcactaaggatgatatgca 47
|||||||||||||||||||| |||| | |||||||||||
Sbjct: 7 gttgttgacagaagatagagagcacagatgatgatatgca 46
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcac 125
|||||||||||||||| |||||||||||||
Sbjct: 65 tcctttgtgctctctatgcttctgtcatcac 95
>39799_aly-MIR157b:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcac 125
|||||||||||||||| |||||||||||||
Sbjct: 67 tcctttgtgctctctaagcttctgtcatcac 97
>41077_gra-MIR157b:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatca 124
|||||||||||||||| ||||||||||||
Sbjct: 60 tcctttgtgctctctatgcttctgtcatca 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcac 32
|||||||||||||||||||| ||||
Sbjct: 1 gttgttgacagaagatagagagcac 25
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcac 32
|||||||||||||||||||| ||||
Sbjct: 7 gttgttgacagaagatagagagcac 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacct 127
|||||||||||||||| |||||| ||||||||
Sbjct: 65 tcctttgtgctctctatgcttctgccatcacct 97
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatc 123
|||||||||||||||| |||||||||||
Sbjct: 55 tcctttgtgctctctatgcttctgtcatc 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 13 tgacagaagatagagggcactaaggatgatatgcat 48
||||||||||||||| |||| | ||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgatatgcat 36
>41076_gra-MIR157a:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gttgttgacagaagatagagggcac 32
|||||||||||||||||||| ||||
Sbjct: 1 gttgttgacagaagatagagagcac 25
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 95 tcctttgtgctctctagacttctgtcatcacc 126
||||||||||||| || ||||||||||||||
Sbjct: 70 tcctttgtgctctttatgcttctgtcatcacc 101
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 94 ttcctttgtgctctctagacttctgtcatcacc 126
|||||||||||||| || ||||||||||||||
Sbjct: 62 ttcctttgtgctctttattcttctgtcatcacc 94
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 ttgttgacagaagatagagggcac 32
||||||||||||||||||| ||||
Sbjct: 18 ttgttgacagaagatagagagcac 41
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 ttgttgacagaagatagagggcac 32
||||||||||||||||||| ||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
>40431_gma-MIR156g:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 ttgttgacagaagatagagggcac 32
||||||||||||||||||| ||||
Sbjct: 21 ttgttgacagaagatagagagcac 44
>40335_rco-MIR156f:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 ttgttgacagaagatagagggcac 32
||||||||||||||||||| ||||
Sbjct: 3 ttgttgacagaagatagagagcac 26
