miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42370_osa-MIR2124a:mirbase
          Length = 249

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 98/117 (83%), Gaps = 5/117 (4%)
 Strand = Plus / Plus

                                                                       
Query: 49  aatcgcgagacgaatctttttagcctagttactccatgattagcc--ttaagtgctacag 106
           |||||||||||||||||||| |||||| |||  |||||||| | |  |   |||||||||
Sbjct: 66  aatcgcgagacgaatcttttgagcctaattataccatgatttgacaatgtggtgctacag 125

                                                                    
Query: 107 taacccacatatgctaatgacagattaattatgcttaataaatttgtcttgcagttt 163
           |||   | || |||||||||| ||||||||| ||||||||||||||||| |||||||
Sbjct: 126 taa---atatttgctaatgacggattaattaggcttaataaatttgtctcgcagttt 179




>42079_osa-MIR442:mirbase
          Length = 233

 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 58/66 (87%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                       
Query: 98  gtgctacagtaacccacatatgctaatgacagattaattatgcttaataaatttgtcttg 157
           ||||||||||||   |||| |||||||||| ||||||||| |||||||||||| |||| |
Sbjct: 112 gtgctacagtaa---acatttgctaatgacggattaattaggcttaataaattcgtctcg 168

                 
Query: 158 cagttt 163
           ||||||
Sbjct: 169 cagttt 174




>42377_osa-MIR2124h:mirbase
          Length = 275

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 51/58 (87%), Gaps = 3/58 (5%)
 Strand = Plus / Plus

                                                                     
Query: 98  gtgctacagtaacccacatatgctaatgacagattaattatgcttaataaatttgtct 155
           ||||||||||||   ||||||||||| ||  ||||||||| |||||||||||||||||
Sbjct: 140 gtgctacagtaa---acatatgctaacgagggattaattaggcttaataaatttgtct 194




>42374_osa-MIR2124e:mirbase
          Length = 247

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 93/113 (82%), Gaps = 5/113 (4%)
 Strand = Plus / Plus

                                                                       
Query: 53  gcgagacgaatctttttagcctagttactccatgattagcc--ttaagtgctacagtaac 110
           |||||||||||||||| |||||| || |||||||||| | |  |   |||||||| ||| 
Sbjct: 68  gcgagacgaatcttttaagcctaattgctccatgatttgacaatgtggtgctacaataa- 126

                                                                
Query: 111 ccacatatgctaatgacagattaattatgcttaataaatttgtcttgcagttt 163
             |||| ||||||||||||||||||||  | ||||||||| |||| |||||||
Sbjct: 127 --acatttgctaatgacagattaattagacataataaattcgtctcgcagttt 177




>42372_osa-MIR2124c:mirbase
          Length = 248

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 118 tgctaatgacagattaattatgcttaataaatttgtct 155
           ||||||||| |||||||||| |||||||||||| ||||
Sbjct: 133 tgctaatgatagattaattaggcttaataaattcgtct 170




>42094_osa-MIR445c:mirbase
          Length = 260

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 54  cgagacgaatctttttagcctagttactccatgattag 91
           ||||||||||||||| |||||| |||| ||||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattacaccatgattag 136




>42099_osa-MIR445h:mirbase
          Length = 277

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 51  tcgcgagacgaatctttttagcctagttactccatgattag 91
           |||||||||||||||||| || ||| |||| ||||||||||
Sbjct: 184 tcgcgagacgaatcttttgagtctaattacaccatgattag 144




>42097_osa-MIR445f:mirbase
          Length = 305

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 51  tcgcgagacgaatctttttagcctagttactccatgattag 91
           |||||||||||||||||| || ||| |||| ||||||||||
Sbjct: 199 tcgcgagacgaatcttttgagtctaattacaccatgattag 159




>42096_osa-MIR445e:mirbase
          Length = 265

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 51  tcgcgagacgaatctttttagcctagttactccatgattag 91
           |||||||||||||||||| || ||| |||| ||||||||||
Sbjct: 178 tcgcgagacgaatcttttgagtctaattacaccatgattag 138




>42093_osa-MIR445b:mirbase
          Length = 264

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 51  tcgcgagacgaatctttttagcctagttactccatgattag 91
           |||||||||||||||||| || ||| |||| ||||||||||
Sbjct: 177 tcgcgagacgaatcttttgagtctaattacaccatgattag 137




>42092_osa-MIR445a:mirbase
          Length = 268

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 51  tcgcgagacgaatctttttagcctagttactccatgatt 89
           |||||||||||||||||| || ||| |||| ||||||||
Sbjct: 188 tcgcgagacgaatcttttgagtctaattacaccatgatt 150




>42373_osa-MIR2124d:mirbase
          Length = 250

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 118 tgctaatgacagattaattatgcttaataaatttgtcttgcagttt 163
           ||||||||||  |||||||| |||||||||||| | || |||||||
Sbjct: 135 tgctaatgacgaattaattaggcttaataaattcgactcgcagttt 180