miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42528_sbi-MIR168:mirbase
          Length = 106

 Score =  109 bits (55), Expect = 3e-25
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                      
Query: 6  tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
          ||||| |||||||||||| |||||||||||| ||| ||||||||| ||||||||||| ||
Sbjct: 15 tcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatcccgcc 74

                                 
Query: 66 ttgcaccaagggaatccgagccg 88
          |||||||||| ||||||||||||
Sbjct: 75 ttgcaccaagtgaatccgagccg 97




>42741_zma-MIR168a:mirbase
          Length = 104

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 70/83 (84%), Gaps = 2/83 (2%)
 Strand = Plus / Plus

                                                                      
Query: 6  tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
          ||||| |||||||||||| ||||||||| || |||| ||   ||| |||| |||||| ||
Sbjct: 15 tcgggctcgcttggtgcagatcgggacccgccgcccggcc--gacgggacggatcccgcc 72

                                 
Query: 66 ttgcaccaagggaatccgagccg 88
          |||||||||| ||||| ||||||
Sbjct: 73 ttgcaccaagtgaatcggagccg 95




>42470_ssp-MIR168a:mirbase
          Length = 99

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 70/83 (84%), Gaps = 2/83 (2%)
 Strand = Plus / Plus

                                                                      
Query: 6  tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
          ||||| |||||||||||| ||||||||| || |||| ||   ||| |||| |||||| ||
Sbjct: 12 tcgggctcgcttggtgcagatcgggacccgccgcccggcc--gacgggacggatcccgcc 69

                                 
Query: 66 ttgcaccaagggaatccgagccg 88
          |||||||||| ||||| ||||||
Sbjct: 70 ttgcaccaagtgaatcggagccg 92




>42459_sof-MIR168a:mirbase
          Length = 104

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 70/83 (84%), Gaps = 2/83 (2%)
 Strand = Plus / Plus

                                                                      
Query: 6  tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
          ||||| |||||||||||| ||||||||| || |||| ||   ||| |||| |||||| ||
Sbjct: 15 tcgggctcgcttggtgcagatcgggacccgccgcccggcc--gacgggacggatcccgcc 72

                                 
Query: 66 ttgcaccaagggaatccgagccg 88
          |||||||||| ||||| ||||||
Sbjct: 73 ttgcaccaagtgaatcggagccg 95




>42742_zma-MIR168b:mirbase
          Length = 104

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 69/83 (83%), Gaps = 2/83 (2%)
 Strand = Plus / Plus

                                                                      
Query: 6  tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
          ||||| |||||||||||| ||||||||| || |||| |  | ||| |||| |||||| ||
Sbjct: 15 tcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacgggacggatcccgcc 72

                                 
Query: 66 ttgcaccaagggaatccgagccg 88
          ||||| |||| ||||| ||||||
Sbjct: 73 ttgcatcaagtgaatcggagccg 95




>41888_hvu-MIR168:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                      
Query: 6  tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
          ||||| |||||||||||| |||||||||  | |||| || | ||| || | |||||| ||
Sbjct: 17 tcgggctcgcttggtgcagatcgggaccctccgccc-gccccgacgggccggatcccgcc 75

                                 
Query: 66 ttgcaccaagggaatccgagccg 88
          |||||||||| ||||| ||||||
Sbjct: 76 ttgcaccaagtgaatcggagccg 98




>41887_hvu-MIR168:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                      
Query: 6  tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
          ||||| |||||||||||| |||||||||  | |||| || | ||| || | |||||| ||
Sbjct: 17 tcgggctcgcttggtgcagatcgggaccctccgccc-gccccgacgggccggatcccgcc 75

                                 
Query: 66 ttgcaccaagggaatccgagccg 88
          |||||||||| ||||| ||||||
Sbjct: 76 ttgcaccaagtgaatcggagccg 98




>42460_sof-MIR168b:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                               
Query: 52 ggacagatcccaccttgcaccaagggaatccgagccg 88
          |||| |||||| |||||||||||| ||||| ||||||
Sbjct: 58 ggacggatcccgccttgcaccaagtgaatcggagccg 94




>41962_osa-MIR168a:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 6  tcgggttcgcttggtgcaaatcgggacc 33
          ||||| |||||||||||| |||||||||
Sbjct: 5  tcgggctcgcttggtgcagatcgggacc 32



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 57 gatcccaccttgcaccaagggaatccgagccg 88
          |||||| |||||||||||| ||||| ||||||
Sbjct: 56 gatcccgccttgcaccaagtgaatcggagccg 87




>41961_osa-MIR168a:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 6  tcgggttcgcttggtgcaaatcgggacc 33
          ||||| |||||||||||| |||||||||
Sbjct: 5  tcgggctcgcttggtgcagatcgggacc 32



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 57 gatcccaccttgcaccaagggaatccgagccg 88
          |||||| |||||||||||| ||||| ||||||
Sbjct: 56 gatcccgccttgcaccaagtgaatcggagccg 87




>41753_bdi-MIR168:mirbase
          Length = 136

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 6  tcgggttcgcttggtgcaaatcgggacc 33
          ||||| |||||||||||| |||||||||
Sbjct: 25 tcgggctcgcttggtgcagatcgggacc 52



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 57  gatcccaccttgcaccaagggaatccgagccg 88
           |||||| |||||||||||| ||||| ||||||
Sbjct: 76  gatcccgccttgcaccaagtgaatcggagccg 107