miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42480_ssp-MIR444c:mirbase
          Length = 108

 Score =  206 bits (104), Expect = 3e-54
 Identities = 107/108 (99%)
 Strand = Plus / Minus

                                                                       
Query: 12  ggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcaaa 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 108 ggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatggttcgaa 49

                                                           
Query: 72  aaccaattttcttgcaagatatgcagttgctgcctctagcttgtcacc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48  aaccaattttcttgcaagatatgcagttgctgcctctagcttgtcacc 1




>42086_osa-MIR444c:mirbase
          Length = 138

 Score =  163 bits (82), Expect = 4e-41
 Identities = 106/114 (92%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcgg 60
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 135 tggcaaagggaggcagcaagcttgagacaacaactgcacagcttgcaagaaaatcatcgg 76

                                                                 
Query: 61  tatggttcaaaaaccaattttcttgcaagatatgcagttgctgcctctagcttg 114
           |||||    |||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 75  tatggccataaaaccgattttcttgcaagatatgcagttgctgtctctagcttg 22



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                        
Query: 9  ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaat 54
          |||||| ||||||| |||||| |||||||| | |||||||||||||
Sbjct: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaaat 59




>42085_osa-MIR444c:mirbase
          Length = 138

 Score =  163 bits (82), Expect = 4e-41
 Identities = 106/114 (92%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcgg 60
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 135 tggcaaagggaggcagcaagcttgagacaacaactgcacagcttgcaagaaaatcatcgg 76

                                                                 
Query: 61  tatggttcaaaaaccaattttcttgcaagatatgcagttgctgcctctagcttg 114
           |||||    |||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 75  tatggccataaaaccgattttcttgcaagatatgcagttgctgtctctagcttg 22



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                        
Query: 9  ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaat 54
          |||||| ||||||| |||||| |||||||| | |||||||||||||
Sbjct: 14 ggaggcggcaagctagagacagcaactgcatatcttgcaagaaaat 59




>42084_osa-MIR444b:mirbase
          Length = 138

 Score =  153 bits (77), Expect = 4e-38
 Identities = 124/137 (90%), Gaps = 7/137 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcgg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 137 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaatcatcgg 78

                                                                       
Query: 61  tatggt-tcaaaaacc-----aattttcttgcaagatatgcagttgctgcctctagcttg 114
           |||||| | |||||||      ||||||||||||||| ||||||||||||| | ||||||
Sbjct: 77  tatggtctgaaaaaccctaaagattttcttgcaagatgtgcagttgctgccacaagcttg 18

                            
Query: 115 tcacca-ccccttgcat 130
           |||||| ||||||||||
Sbjct: 17  tcaccatccccttgcat 1



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 17 caagcttgagacaacaactgcacaacttgcaagaaaat 54
          |||||||| | || |||||||||| |||||||||||||
Sbjct: 18 caagcttgtggcagcaactgcacatcttgcaagaaaat 55




>42083_osa-MIR444b:mirbase
          Length = 138

 Score =  153 bits (77), Expect = 4e-38
 Identities = 124/137 (90%), Gaps = 7/137 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcgg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 137 tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaatcatcgg 78

                                                                       
Query: 61  tatggt-tcaaaaacc-----aattttcttgcaagatatgcagttgctgcctctagcttg 114
           |||||| | |||||||      ||||||||||||||| ||||||||||||| | ||||||
Sbjct: 77  tatggtctgaaaaaccctaaagattttcttgcaagatgtgcagttgctgccacaagcttg 18

                            
Query: 115 tcacca-ccccttgcat 130
           |||||| ||||||||||
Sbjct: 17  tcaccatccccttgcat 1



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 17 caagcttgagacaacaactgcacaacttgcaagaaaat 54
          |||||||| | || |||||||||| |||||||||||||
Sbjct: 18 caagcttgtggcagcaactgcacatcttgcaagaaaat 55




>42091_osa-MIR444f:mirbase
          Length = 154

 Score = 79.8 bits (40), Expect = 5e-16
 Identities = 43/44 (97%)
 Strand = Plus / Minus

                                                       
Query: 9   ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
           |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 153 ggaggcagcaagcttgaggcaacaactgcacaacttgcaagaaa 110



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 79  tttcttgcaagatatgcagttgctgcctctagcttg 114
           ||||||||||| | |||||||| |||||| ||||||
Sbjct: 110 tttcttgcaagttgtgcagttgttgcctcaagcttg 145




>42089_osa-MIR444d:mirbase
          Length = 143

 Score = 79.8 bits (40), Expect = 5e-16
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                               
Query: 1   tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
           ||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 140 tggcagagggaggcagcaagcttgaggcagcaactgcacaacttgcaagaaa 89



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 79  tttcttgcaagatatgcagttgctgcctctagcttg 114
           ||||||||||| | ||||||||||||||| ||||||
Sbjct: 89  tttcttgcaagttgtgcagttgctgcctcaagcttg 124



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                   
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
          |||| ||||| |||| |||||||||||  ||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgcaagaaa 57




>42088_osa-MIR444d:mirbase
          Length = 143

 Score = 79.8 bits (40), Expect = 5e-16
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                               
Query: 1   tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
           ||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 140 tggcagagggaggcagcaagcttgaggcagcaactgcacaacttgcaagaaa 89



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 79  tttcttgcaagatatgcagttgctgcctctagcttg 114
           ||||||||||| | ||||||||||||||| ||||||
Sbjct: 89  tttcttgcaagttgtgcagttgctgcctcaagcttg 124



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                   
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
          |||| ||||| |||| |||||||||||  ||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgcaagaaa 57




>42087_osa-MIR444d:mirbase
          Length = 143

 Score = 79.8 bits (40), Expect = 5e-16
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                               
Query: 1   tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
           ||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 140 tggcagagggaggcagcaagcttgaggcagcaactgcacaacttgcaagaaa 89



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 79  tttcttgcaagatatgcagttgctgcctctagcttg 114
           ||||||||||| | ||||||||||||||| ||||||
Sbjct: 89  tttcttgcaagttgtgcagttgctgcctcaagcttg 124



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                   
Query: 12 ggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
          |||| ||||| |||| |||||||||||  ||||||||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttgcaagaaa 57




>42648_tae-MIR444:mirbase
          Length = 426

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 1   tggcaaagggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
           |||||||||||||||||||||||||| || ||||||||  ||||||||||||
Sbjct: 185 tggcaaagggaggcagcaagcttgaggcagcaactgcatgacttgcaagaaa 134



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 79  tttcttgcaagatatgcagttgctgcctctagcttg 114
           |||||||||||  |||||||||||||||| ||||||
Sbjct: 134 tttcttgcaagtcatgcagttgctgcctcaagcttg 169




>42082_osa-MIR444a:mirbase
          Length = 131

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 9   ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatg 64
           |||||||||||||||||| || |||||||| |||||||||||| || |||||||||
Sbjct: 123 ggaggcagcaagcttgaggcagcaactgcataacttgcaagaatatcatcggtatg 68



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 80  ttcttgcaagatatgcagttgctgcctctagcttg 114
           |||||||||| ||||||||||||||||| ||||||
Sbjct: 81  ttcttgcaagttatgcagttgctgcctcaagcttg 115




>42081_osa-MIR444a:mirbase
          Length = 131

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 9   ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaaattatcggtatg 64
           |||||||||||||||||| || |||||||| |||||||||||| || |||||||||
Sbjct: 123 ggaggcagcaagcttgaggcagcaactgcataacttgcaagaatatcatcggtatg 68



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 80  ttcttgcaagatatgcagttgctgcctctagcttg 114
           |||||||||| ||||||||||||||||| ||||||
Sbjct: 81  ttcttgcaagttatgcagttgctgcctcaagcttg 115




>41894_hvu-MIR444b:mirbase
          Length = 121

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                       
Query: 9   ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
           |||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 ggagtcagcaagcttgagacagcaactgcacaacttgcaagaaa 78



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 79  tttcttgcaagatatgcagttgctgcctctagcttg 114
           ||||||||||| | ||||||||||| ||| ||||||
Sbjct: 78  tttcttgcaagttgtgcagttgctgtctcaagcttg 113




>42478_ssp-MIR444a:mirbase
          Length = 105

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 17  caagcttgagacaacaactgcacaacttgcaagaaaa 53
           |||||||||| ||||||||||||||||||||||||||
Sbjct: 105 caagcttgaggcaacaactgcacaacttgcaagaaaa 69



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 78  ttttcttgcaagatatgcagttgctgcctctagcttg 114
           |||||||||||| | |||||||| |||||| ||||||
Sbjct: 69  ttttcttgcaagttgtgcagttgttgcctcaagcttg 105




>42649_tae-MIR444b:mirbase
          Length = 162

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 9   ggaggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
           |||||||||||||||||| || ||||||||| ||||||||||||
Sbjct: 153 ggaggcagcaagcttgaggcagcaactgcacgacttgcaagaaa 110



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 79  tttcttgcaagatatgcagttgctgcctctagcttg 114
           |||||||||||   ||||||||||||||| ||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagcttg 145




>42479_ssp-MIR444b:mirbase
          Length = 106

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 17  caagcttgagacaacaactgcacaacttgcaagaaa 52
           |||||||||| |||||||||||||||||||||||||
Sbjct: 106 caagcttgaggcaacaactgcacaacttgcaagaaa 71



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 79  tttcttgcaagatatgcagttgctgcctctagcttg 114
           ||||||||||| | |||||||| |||||| ||||||
Sbjct: 71  tttcttgcaagttgtgcagttgttgcctcaagcttg 106




>41893_hvu-MIR444a:mirbase
          Length = 114

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 11  aggcagcaagcttgagacaacaactgcacaacttgcaagaaa 52
           |||||||||||||||| || ||||||||| ||||||||||||
Sbjct: 114 aggcagcaagcttgaggcagcaactgcacgacttgcaagaaa 73



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 79  tttcttgcaagatatgcagttgctgcctctagcttg 114
           |||||||||||   ||||||||||||||| ||||||
Sbjct: 73  tttcttgcaagtcgtgcagttgctgcctcaagcttg 108




>42090_osa-MIR444e:mirbase
          Length = 140

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 79  tttcttgcaagatatgcagttgctgcctctagctt 113
           ||||| ||||| |||||||||| ||||||||||||
Sbjct: 56  tttctcgcaagttatgcagttggtgcctctagctt 22



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 85  gcaagatatgcagttgctgcctctagctt 113
           ||||| ||||||||||||||||| |||||
Sbjct: 91  gcaagttatgcagttgctgcctcaagctt 119




>41805_bdi-MIR444:mirbase
          Length = 110

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 13  gcagcaagcttgagacaacaactgcacaactt 44
           |||||||||||||| || |||||||| |||||
Sbjct: 110 gcagcaagcttgaggcagcaactgcataactt 79



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 91  tatgcagttgctgcctctagcttg 114
           ||||||||||||||||| ||||||
Sbjct: 83  tatgcagttgctgcctcaagcttg 106