miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26607_cfa-let-7b:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 37 gggtgaggtagtaggttgtgtgg 59
>27321_mdo-let-7b:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 5 gggtgaggtagtaggttgtgtgg 27
>27632_mml-let-7b:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 3 gggtgaggtagtaggttgtgtgg 25
>28342_hsa-let-7b:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 3 gggtgaggtagtaggttgtgtgg 25
>30129_ptr-let-7b:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 2 gggtgaggtagtaggttgtgtgg 24
>30734_ppy-let-7b:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 3 gggtgaggtagtaggttgtgtgg 25
>31754_mmu-let-7b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 4 gggtgaggtagtaggttgtgtgg 26
>32640_rno-let-7b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 4 gggtgaggtagtaggttgtgtgg 26
>33111_bta-let-7b:mirbase
Length = 81
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 3 gggtgaggtagtaggttgtgtgg 25
>34171_dre-let-7b:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 8 gggtgaggtagtaggttgtgtgg 30
>34528_fru-let-7b:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 3 gggtgaggtagtaggttgtgtgg 25
>34676_tni-let-7b:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgtgtgg 23
|||||||||||||||||||||||
Sbjct: 3 gggtgaggtagtaggttgtgtgg 25
>33789_bta-mir-3596:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 2 ggtgaggtagtaggttgtgtgg 23
||||||||||||||||||||||
Sbjct: 83 ggtgaggtagtaggttgtgtgg 62
>25871_gga-let-7b:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 tgaggtagtaggttgtgtgg 23
||||||||||||||||||||
Sbjct: 6 tgaggtagtaggttgtgtgg 25
>26379_tgu-let-7b:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 tgaggtagtaggttgtgtgg 23
||||||||||||||||||||
Sbjct: 11 tgaggtagtaggttgtgtgg 30
>31410_oan-let-7b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 4 tgaggtagtaggttgtgtgg 23
||||||||||||||||||||
Sbjct: 5 tgaggtagtaggttgtgtgg 24
>25411_pma-let-7a-4:mirbase
Length = 85
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 8 gggtgaggtagtaggttgt 26
>25680_xtr-let-7e-2:mirbase
Length = 93
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 9 gggtgaggtagtaggttgt 27
>25870_gga-let-7a-3:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 1 gggtgaggtagtaggttgt 19
>26375_tgu-let-7a-1:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 8 gggtgaggtagtaggttgt 26
>26930_eca-let-7a-2:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 1 gggtgaggtagtaggttgt 19
>27320_mdo-let-7a-3:mirbase
Length = 79
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 2 gggtgaggtagtaggttgt 20
>27631_mml-let-7a-3:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 1 gggtgaggtagtaggttgt 19
>28341_hsa-let-7a-3:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 1 gggtgaggtagtaggttgt 19
>30733_ppy-let-7a-3:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 1 gggtgaggtagtaggttgt 19
>31756_mmu-let-7c-2:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 11 gggtgaggtagtaggttgt 29
>32642_rno-let-7c-2:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 11 gggtgaggtagtaggttgt 29
>33110_bta-let-7a-3:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 1 gggtgaggtagtaggttgt 19
>34167_dre-let-7a-3:mirbase
Length = 107
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 15 gggtgaggtagtaggttgt 33
>34526_fru-let-7a-2:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 1 gggtgaggtagtaggttgt 19
>34673_tni-let-7a-1:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 3 gggtgaggtagtaggttgt 21
>34674_tni-let-7a-2:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 9 gggtgaggtagtaggttgt 27
>34862_sko-let-7:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 18 gggtgaggtagtaggttgt 36
>35337_ame-let-7:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 10 gggtgaggtagtaggttgt 28
>37568_ngi-let-7:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 9 gggtgaggtagtaggttgt 27
>37629_nvi-let-7:mirbase
Length = 99
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gggtgaggtagtaggttgt 19
|||||||||||||||||||
Sbjct: 10 gggtgaggtagtaggttgt 28
