miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41113_tcc-MIR169l:mirbase
          Length = 122

 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 47 tagtgcagccaaggatgacttgccgg 72
          ||||||||||||||||||||||||||
Sbjct: 16 tagtgcagccaaggatgacttgccgg 41




>40687_mtr-MIR169j:mirbase
          Length = 77

 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 48 agtgcagccaaggatgacttgccggt 73
          ||||||||||||||||||||||||||
Sbjct: 2  agtgcagccaaggatgacttgccggt 27




>41607_vvi-MIR169k:mirbase
          Length = 122

 Score = 50.1 bits (25), Expect = 1e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 48 agtgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||||
Sbjct: 9  agtgcagccaaggatgacttgccgg 33




>41606_vvi-MIR169j:mirbase
          Length = 122

 Score = 50.1 bits (25), Expect = 1e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 48 agtgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||||
Sbjct: 9  agtgcagccaaggatgacttgccgg 33




>41965_osa-MIR169b:mirbase
          Length = 128

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 50 tgcagccaaggatgacttgccggt 73
          ||||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccggt 32




>41619_vvi-MIR169w:mirbase
          Length = 143

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 49 gtgcagccaaggatgacttgccgg 72
          ||||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccgg 33




>41536_sly-MIR169c:mirbase
          Length = 147

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 48 agtgcagccaaggatgacttgccg 71
          ||||||||||||||||||||||||
Sbjct: 37 agtgcagccaaggatgacttgccg 60




>41360_ptc-MIR169f:mirbase
          Length = 239

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 49 gtgcagccaaggatgacttgccgg 72
          ||||||||||||||||||||||||
Sbjct: 8  gtgcagccaaggatgacttgccgg 31




>41112_tcc-MIR169k:mirbase
          Length = 132

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 49 gtgcagccaaggatgacttgccgg 72
          ||||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccgg 41




>41106_tcc-MIR169e:mirbase
          Length = 147

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 48 agtgcagccaaggatgacttgccg 71
          ||||||||||||||||||||||||
Sbjct: 17 agtgcagccaaggatgacttgccg 40




>41102_tcc-MIR169a:mirbase
          Length = 147

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 48 agtgcagccaaggatgacttgccg 71
          ||||||||||||||||||||||||
Sbjct: 17 agtgcagccaaggatgacttgccg 40




>42745_zma-MIR169c:mirbase
          Length = 134

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccgg 41




>42744_zma-MIR169b:mirbase
          Length = 156

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 gtgcagccaaggatgacttgccg 71
          |||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccg 40




>42743_zma-MIR169a:mirbase
          Length = 130

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 gtgcagccaaggatgacttgccg 71
          |||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccg 40




>41979_osa-MIR169p:mirbase
          Length = 126

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 50  tgcagccaaggatgacttgccgg 72
           |||||||||||||||||||||||
Sbjct: 118 tgcagccaaggatgacttgccgg 96




>41966_osa-MIR169c:mirbase
          Length = 112

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccgg 31




>41964_osa-MIR169a:mirbase
          Length = 173

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 gtgcagccaaggatgacttgccg 71
          |||||||||||||||||||||||
Sbjct: 35 gtgcagccaaggatgacttgccg 57




>41758_bdi-MIR169f:mirbase
          Length = 151

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 31 tgcagccaaggatgacttgccgg 53




>41755_bdi-MIR169c:mirbase
          Length = 151

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 31 tgcagccaaggatgacttgccgg 53




>41615_vvi-MIR169s:mirbase
          Length = 99

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgg 33




>41603_vvi-MIR169g:mirbase
          Length = 121

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 gtgcagccaaggatgacttgccg 71
          |||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32




>41602_vvi-MIR169f:mirbase
          Length = 184

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 gtgcagccaaggatgacttgccg 71
          |||||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccg 32




>41599_vvi-MIR169c:mirbase
          Length = 90

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgg 33




>41597_vvi-MIR169a:mirbase
          Length = 124

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgg 33




>41534_sly-MIR169a:mirbase
          Length = 149

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccgg 61




>41361_ptc-MIR169g:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccgg 31




>41358_ptc-MIR169d:mirbase
          Length = 111

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccgg 31




>41176_aqc-MIR169c:mirbase
          Length = 111

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 3  tgcagccaaggatgacttgccgg 25




>41104_tcc-MIR169c:mirbase
          Length = 142

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 gtgcagccaaggatgacttgccg 71
          |||||||||||||||||||||||
Sbjct: 18 gtgcagccaaggatgacttgccg 40




>41103_tcc-MIR169b:mirbase
          Length = 193

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccgg 41




>40684_mtr-MIR169g:mirbase
          Length = 211

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 4  tgcagccaaggatgacttgccgg 26




>40449_gma-MIR169a:mirbase
          Length = 121

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccgg 41




>40273_bna-MIR169b:mirbase
          Length = 188

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 gtgcagccaaggatgacttgccg 71
          |||||||||||||||||||||||
Sbjct: 15 gtgcagccaaggatgacttgccg 37




>40272_bna-MIR169a:mirbase
          Length = 132

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 gtgcagccaaggatgacttgccg 71
          |||||||||||||||||||||||
Sbjct: 16 gtgcagccaaggatgacttgccg 38




>40046_ath-MIR169b:mirbase
          Length = 181

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 41 tgcagccaaggatgacttgccgg 63




>40045_ath-MIR169a:mirbase
          Length = 226

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 gtgcagccaaggatgacttgccg 71
          |||||||||||||||||||||||
Sbjct: 15 gtgcagccaaggatgacttgccg 37




>39835_aly-MIR169b:mirbase
          Length = 173

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 50 tgcagccaaggatgacttgccgg 72
          |||||||||||||||||||||||
Sbjct: 44 tgcagccaaggatgacttgccgg 66




>39834_aly-MIR169a:mirbase
          Length = 263

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 49 gtgcagccaaggatgacttgccg 71
          |||||||||||||||||||||||
Sbjct: 24 gtgcagccaaggatgacttgccg 46




>42760_zma-MIR169r:mirbase
          Length = 126

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 51 gcagccaaggatgacttgccgg 72
          ||||||||||||||||||||||
Sbjct: 1  gcagccaaggatgacttgccgg 22




>41359_ptc-MIR169e:mirbase
          Length = 166

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 51 gcagccaaggatgacttgccgg 72
          ||||||||||||||||||||||
Sbjct: 10 gcagccaaggatgacttgccgg 31




>41357_ptc-MIR169c:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 50 tgcagccaaggatgacttgccg 71
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30




>41356_ptc-MIR169b:mirbase
          Length = 113

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 50 tgcagccaaggatgacttgccg 71
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30




>41349_ptc-MIR169a:mirbase
          Length = 165

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 50 tgcagccaaggatgacttgccg 71
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30




>40679_mtr-MIR169b:mirbase
          Length = 121

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 50 tgcagccaaggatgacttgccg 71
          ||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40




>40678_mtr-MIR169a:mirbase
          Length = 121

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 50 tgcagccaaggatgacttgccg 71
          ||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40




>40450_gma-MIR169b:mirbase
          Length = 183

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 50 tgcagccaaggatgacttgccg 71
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30




>40047_ath-MIR169c:mirbase
          Length = 411

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 52  cagccaaggatgacttgccggt 73
           ||||||||||||||||||||||
Sbjct: 113 cagccaaggatgacttgccggt 134




>39836_aly-MIR169c:mirbase
          Length = 292

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 52 cagccaaggatgacttgccggt 73
          ||||||||||||||||||||||
Sbjct: 45 cagccaaggatgacttgccggt 66




>42539_sbi-MIR169k:mirbase
          Length = 97

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 cagccaaggatgacttgccgg 72
          |||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccgg 21




>42530_sbi-MIR169b:mirbase
          Length = 102

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 cagccaaggatgacttgccgg 72
          |||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccgg 21




>41373_ptc-MIR169s:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 cagccaaggatgacttgccgg 72
          |||||||||||||||||||||
Sbjct: 12 cagccaaggatgacttgccgg 32




>41362_ptc-MIR169h:mirbase
          Length = 118

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 cagccaaggatgacttgccgg 72
          |||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccgg 31




>40690_mtr-MIR169m:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 53 agccaaggatgacttgccggt 73
          |||||||||||||||||||||
Sbjct: 7  agccaaggatgacttgccggt 27




>40689_mtr-MIR169l:mirbase
          Length = 240

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 53 agccaaggatgacttgccggt 73
          |||||||||||||||||||||
Sbjct: 7  agccaaggatgacttgccggt 27




>40682_mtr-MIR169e:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 53 agccaaggatgacttgccggt 73
          |||||||||||||||||||||
Sbjct: 8  agccaaggatgacttgccggt 28




>40681_mtr-MIR169d:mirbase
          Length = 240

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 53 agccaaggatgacttgccggt 73
          |||||||||||||||||||||
Sbjct: 7  agccaaggatgacttgccggt 27




>40452_gma-MIR169d:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 53 agccaaggatgacttgccggt 73
          |||||||||||||||||||||
Sbjct: 16 agccaaggatgacttgccggt 36




>40357_rco-MIR169b:mirbase
          Length = 93

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 cagccaaggatgacttgccgg 72
          |||||||||||||||||||||
Sbjct: 6  cagccaaggatgacttgccgg 26




>40356_rco-MIR169a:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 cagccaaggatgacttgccgg 72
          |||||||||||||||||||||
Sbjct: 6  cagccaaggatgacttgccgg 26




>40050_ath-MIR169f:mirbase
          Length = 167

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 53 agccaaggatgacttgccggt 73
          |||||||||||||||||||||
Sbjct: 34 agccaaggatgacttgccggt 54




>39839_aly-MIR169f:mirbase
          Length = 184

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 53 agccaaggatgacttgccggt 73
          |||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccggt 63