miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41446_ptc-MIR398b:mirbase
          Length = 85

 Score =  161 bits (81), Expect = 1e-40
 Identities = 84/85 (98%)
 Strand = Plus / Plus

                                                                      
Query: 12 agggttccgacaggagcggccttgggtcacatgcggcggcatccaatgtacttcatgtgt 71
          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1  agggttccgacaggagcggccttgggtcacatgtggcggcatccaatgtacttcatgtgt 60

                                   
Query: 72 tctcaggtcgcccctgccgggcttc 96
          |||||||||||||||||||||||||
Sbjct: 61 tctcaggtcgcccctgccgggcttc 85




>41447_ptc-MIR398c:mirbase
          Length = 97

 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 65 catgtgttctcaggtcgcccctgccgggctt 95
          |||||||||||||||||||||||||||||||
Sbjct: 66 catgtgttctcaggtcgcccctgccgggctt 96




>40382_rco-MIR398b:mirbase
          Length = 126

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 63  ttcatgtgttctcaggtcgcccctgccggg 92
           ||||||||||||||||||||||||||||||
Sbjct: 97  ttcatgtgttctcaggtcgcccctgccggg 126




>42040_osa-MIR398b:mirbase
          Length = 88

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 67 tgtgttctcaggtcgcccctgccggg 92
          ||||||||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctgccggg 83




>41144_tcc-MIR398a:mirbase
          Length = 125

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 66  atgtgttctcaggtcgcccctgccgggctt 95
           ||||||||||||||||||||||| ||||||
Sbjct: 84  atgtgttctcaggtcgcccctgcagggctt 113




>41667_vvi-MIR398c:mirbase
          Length = 88

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 64 tcatgtgttctcaggtcgcccctgc 88
          |||||||||||||||||||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgc 79




>41666_vvi-MIR398b:mirbase
          Length = 88

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 64 tcatgtgttctcaggtcgcccctgc 88
          |||||||||||||||||||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgc 79




>40729_mtr-MIR398b:mirbase
          Length = 87

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 64 tcatgtgttctcaggtcgcccctgc 88
          |||||||||||||||||||||||||
Sbjct: 59 tcatgtgttctcaggtcgcccctgc 83




>41191_aqc-MIR398b:mirbase
          Length = 93

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 65 catgtgttctcaggtcgcccctgc 88
          ||||||||||||||||||||||||
Sbjct: 70 catgtgttctcaggtcgcccctgc 93




>41801_bdi-MIR398c:mirbase
          Length = 131

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 65  catgtgttctcaggtcgcccctg 87
           |||||||||||||||||||||||
Sbjct: 85  catgtgttctcaggtcgcccctg 107




>41799_bdi-MIR398a:mirbase
          Length = 150

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 65  catgtgttctcaggtcgcccctg 87
           |||||||||||||||||||||||
Sbjct: 94  catgtgttctcaggtcgcccctg 116




>42645_tae-MIR398:mirbase
          Length = 120

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 64  tcatgtgttctcaggtcgcccc 85
           ||||||||||||||||||||||
Sbjct: 82  tcatgtgttctcaggtcgcccc 103




>40730_mtr-MIR398c:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 67 tgtgttctcaggtcgcccctgc 88
          ||||||||||||||||||||||
Sbjct: 62 tgtgttctcaggtcgcccctgc 83




>40091_ath-MIR398c:mirbase
          Length = 115

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 63  ttcatgtgttctcaggtcgcccctgc 88
           |||||||||||||||||| |||||||
Sbjct: 81  ttcatgtgttctcaggtcacccctgc 106




>40090_ath-MIR398b:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 63  ttcatgtgttctcaggtcgcccctgc 88
           |||||||||||||||||| |||||||
Sbjct: 82  ttcatgtgttctcaggtcacccctgc 107




>42818_zma-MIR398b:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  catgtgttctcaggtcgcccc 85
           |||||||||||||||||||||
Sbjct: 85  catgtgttctcaggtcgcccc 105




>42817_zma-MIR398a:mirbase
          Length = 140

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  catgtgttctcaggtcgcccc 85
           |||||||||||||||||||||
Sbjct: 117 catgtgttctcaggtcgcccc 137




>42588_sbi-MIR398:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  catgtgttctcaggtcgcccc 85
           |||||||||||||||||||||
Sbjct: 86  catgtgttctcaggtcgcccc 106




>39882_aly-MIR398b:mirbase
          Length = 142

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 65  catgtgttctcaggtcgcccctgc 88
           |||||||||||||||| |||||||
Sbjct: 89  catgtgttctcaggtcacccctgc 112