miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 1 acagatgaagacggggaacaggcagagcatggatggagctactaacagaagtacttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 acagatgaagacggggaacaggcagagcatggatggagctactaacagaagtacttgttt 64
Query: 61 tggctctacccatgcactgcctcttccctggcttgtggct 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tggctctacccatgcactgcctcttccctggcttgtggct 104
>40391_rco-MIR408:mirbase
Length = 92
Score = 95.6 bits (48), Expect = 6e-21
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 8 aagacggggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctc 66
||||| |||||||||||| |||||||||| ||||||||||||| | |||||||||||
Sbjct: 2 aagactgggaacaggcagtgcatggatggggctactaacagaaaacatctgttttggctc 61
Query: 67 tacccatgcactgcctcttccctggctt 94
||||| ||||||||||||||||||||||
Sbjct: 62 tacccctgcactgcctcttccctggctt 89
>41252_csi-MIR408:mirbase
Length = 153
Score = 87.7 bits (44), Expect = 1e-18
Identities = 78/87 (89%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 8 aagacggggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctc 66
|||||||||||||||||||||||||||||| | | |||||| || || |||||||||||
Sbjct: 57 aagacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctc 114
Query: 67 tacccatgcactgcctcttccctggct 93
|||||||||||||||||||||||||
Sbjct: 115 ctcccatgcactgcctcttccctggct 141
>41683_vvi-MIR408:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 56 tgttttggctctacccatgcactgcctcttccctggct 93
|||||| |||||||||||||||||||||||||||||||
Sbjct: 61 tgtttttgctctacccatgcactgcctcttccctggct 98
>40108_ath-MIR408:mirbase
Length = 218
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 56 tgttttggctctacccatgcactgcctcttccctggct 93
||||||| ||||||||||||||||||||||||||||||
Sbjct: 104 tgttttgtctctacccatgcactgcctcttccctggct 141
>39897_aly-MIR408:mirbase
Length = 211
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 56 tgttttggctctacccatgcactgcctcttccctggct 93
||||||| ||||||||||||||||||||||||||||||
Sbjct: 101 tgttttgtctctacccatgcactgcctcttccctggct 138
>41193_aqc-MIR408:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 70 ccatgcactgcctcttccctggct 93
||||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggct 1
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 catgcactgcctcttccctggctt 94
||||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggctt 115
>40405_ahy-MIR408:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 catgcactgcctcttccctggct 93
|||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggct 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgga 37
|||||||||||||||||| |||||
Sbjct: 23 gggaacaggcagagcatgaatgga 46
>40404_ahy-MIR408:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 catgcactgcctcttccctggct 93
|||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggct 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 gggaacaggcagagcatggatgga 37
|||||||||||||||||| |||||
Sbjct: 23 gggaacaggcagagcatgaatgga 46
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 68 acccatgcactgcctcttccctggct 93
|||| |||||||||||||||||||||
Sbjct: 154 acccctgcactgcctcttccctggct 179
>42465_sof-MIR408d:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 68 acccatgcactgcctcttccctggct 93
|||| |||||||||||||||||||||
Sbjct: 172 acccctgcactgcctcttccctggct 197
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 atgcactgcctcttccctggct 93
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 atgcactgcctcttccctggct 93
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>42830_zma-MIR408b:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tgcactgcctcttccctggct 93
|||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggct 146
>42829_zma-MIR408:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tgcactgcctcttccctggct 93
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>42647_tae-MIR408:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tgcactgcctcttccctggct 93
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tgcactgcctcttccctggct 93
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tgcactgcctcttccctggct 93
|||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggct 247
>42464_sof-MIR408c:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tgcactgcctcttccctggct 93
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42463_sof-MIR408b:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tgcactgcctcttccctggct 93
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42462_sof-MIR408a:mirbase
Length = 283
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tgcactgcctcttccctggct 93
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>42052_osa-MIR408:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 tgcactgcctcttccctggct 93
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
