miRNEST 2.0, an integrative microRNA resource :: BLAST
>41510_ptc-MIR530b:mirbase
Length = 172
Score = 182 bits (92), Expect = 5e-47
Identities = 145/159 (91%), Gaps = 4/159 (2%)
Strand = Plus / Plus
Query: 1 ttgcctttatctgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaa 60
||||||||||||||||||||||||||||||| ||||||||| |||| | |||| |||| |
Sbjct: 10 ttgcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccaca 68
Query: 61 aaacaaatccaagttccgtgccgatccagaatgtgggacaattagatatggaaactaata 120
|| ||||| |||||| || |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 69 aacaaaatc-aagttctgt--cgatacagtatgtgggacaattagatatggaaactaata 125
Query: 121 agcttagttgaggtgcaggtgcaagtgcaggtgaatgcc 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 126 agcttagttgaggtgcaggtgcaagtgcaggtgaatgcc 164
>41263_csi-MIR530b:mirbase
Length = 154
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 4 cctttatctgcatttgcacctgcatcttattgcgtt 39
|||||||||||||||||||||||||||| |||||||
Sbjct: 3 cctttatctgcatttgcacctgcatcttgttgcgtt 38
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 131 aggtgcaggtgcaagtgcaggtgaatgcc 159
|||||||| ||||||||||| ||||||||
Sbjct: 126 aggtgcagttgcaagtgcagatgaatgcc 154
>41509_ptc-MIR530a:mirbase
Length = 144
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ttgcctttatctgcatttgcacctgcatctta 32
||||||||||||||||||||||||||| ||||
Sbjct: 10 ttgcctttatctgcatttgcacctgcacctta 41
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 128 ttgaggtgcaggtgcaagtgcaggtgaatgcc 159
|||||||||||||||| |||||||||||||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcaggtgaatgcc 136
>41158_tcc-MIR530b:mirbase
Length = 178
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 gcctttatctgcatttgcacctgca 27
|||||||||||||||||||||||||
Sbjct: 12 gcctttatctgcatttgcacctgca 36
>41157_tcc-MIR530a:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tttatctgcatttgcacctgca 27
||||||||||||||||||||||
Sbjct: 15 tttatctgcatttgcacctgca 36
>41205_aqc-MIR530:mirbase
Length = 142
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tctgcatttgcacctgcatct 30
|||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30
