miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41510_ptc-MIR530b:mirbase
          Length = 172

 Score =  264 bits (133), Expect = 2e-71
 Identities = 147/149 (98%), Gaps = 2/149 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgcctttatctgcatttgcacctgcatcttattgcgtttgttttgtttttgactccgac 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 10  ttgcctttatctgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactcc-ac 67

                                                                       
Query: 61  aaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaactaataag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aaacaaaatcaagttctgtcgatacagtatgtgggacaattagatatggaaactaataag 127

                                        
Query: 121 cttagttgaggtgcaggtgcaagtgcagg 149
           |||||||||||||||||||||||||||||
Sbjct: 128 cttagttgaggtgcaggtgcaagtgcagg 156




>41263_csi-MIR530b:mirbase
          Length = 154

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                              
Query: 4  cctttatctgcatttgcacctgcatcttattgcgtt 39
          |||||||||||||||||||||||||||| |||||||
Sbjct: 3  cctttatctgcatttgcacctgcatcttgttgcgtt 38




>41509_ptc-MIR530a:mirbase
          Length = 144

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 1  ttgcctttatctgcatttgcacctgcatctta 32
          ||||||||||||||||||||||||||| ||||
Sbjct: 10 ttgcctttatctgcatttgcacctgcacctta 41



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 126 ttgaggtgcaggtgcaagtgcagg 149
           |||||||||||||||| |||||||
Sbjct: 105 ttgaggtgcaggtgcaggtgcagg 128




>41158_tcc-MIR530b:mirbase
          Length = 178

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 3  gcctttatctgcatttgcacctgca 27
          |||||||||||||||||||||||||
Sbjct: 12 gcctttatctgcatttgcacctgca 36




>41157_tcc-MIR530a:mirbase
          Length = 163

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 6  tttatctgcatttgcacctgca 27
          ||||||||||||||||||||||
Sbjct: 15 tttatctgcatttgcacctgca 36




>41205_aqc-MIR530:mirbase
          Length = 142

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 10 tctgcatttgcacctgcatct 30
          |||||||||||||||||||||
Sbjct: 10 tctgcatttgcacctgcatct 30