miRNEST 2.0, an integrative microRNA resource :: BLAST
>40448_gma-MIR168:mirbase
Length = 125
Score = 93.7 bits (47), Expect = 3e-20
Identities = 99/113 (87%), Gaps = 5/113 (4%)
Strand = Plus / Plus
Query: 3 gcggtctctaattcgcttggtgcaggtcgggaaccgatcttcccgcgcgtaatgga--tg 60
|||||||||||||||||||||||||||||||||||| | || |||||| |||||| |
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaaccggtttt--cgcgcggaatggaggag 64
Query: 61 ccgttggcggcggcgaatttggatcccgccttgcatcaaatgaatcggaggcc 113
| || | ||||| |||| ||||||||||||||||||||| |||||||||||||
Sbjct: 65 cggtcgccggcgccgaa-ttggatcccgccttgcatcaactgaatcggaggcc 116
>41596_vvi-MIR168:mirbase
Length = 132
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 5 ggtctctaattcgcttggtgcaggtcgggaaccga 39
|||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaaccga 35
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 73 gcgaatttggatcccgccttgcatcaaatgaatcggag 110
||||||| |||||||||||||||||| ||||||||||
Sbjct: 90 gcgaattccgatcccgccttgcatcaactgaatcggag 127
>41215_crt-MIR168:mirbase
Length = 201
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 3 gcggtctctaattcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||||||||||||
Sbjct: 9 gcggtctctaattcgcttggtgcaggtcgggaac 42
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 79 ttggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||||||||| ||||||||||
Sbjct: 137 ttggatcccgccttgcatcaactgaatcggag 168
>41210_ccl-MIR168:mirbase
Length = 176
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 3 gcggtctctaattcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||||||||||||
Sbjct: 8 gcggtctctaattcgcttggtgcaggtcgggaac 41
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 79 ttggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||||||||| ||||||||||
Sbjct: 136 ttggatcccgccttgcatcaactgaatcggag 167
>41101_tcc-MIR168:mirbase
Length = 167
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 3 gcggtctctaattcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||||||||||||
Sbjct: 9 gcggtctctaattcgcttggtgcaggtcgggaac 42
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 79 ttggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||||||||| ||||||||||
Sbjct: 121 ttggatcccgccttgcatcaactgaatcggag 152
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 5 ggtctctaattcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 79 ttggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||||||||| ||||||||||
Sbjct: 104 ttggatcccgccttgcatcaactgaatcggag 135
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 79 ttggatcccgccttgcatcaaatgaatcggagg 111
||||||||||||||||||||| |||||||||||
Sbjct: 128 ttggatcccgccttgcatcaactgaatcggagg 160
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 ggtctctaattcgcttggtgcaggtcgggaac 36
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaac 32
>40355_rco-MIR168:mirbase
Length = 131
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 ctaattcgcttggtgcaggtcgggaac 36
|||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaac 27
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 79 ttggatcccgccttgcatcaaatgaatcg 107
||||||||||||||||||||| |||||||
Sbjct: 100 ttggatcccgccttgcatcaactgaatcg 128
>40043_ath-MIR168a:mirbase
Length = 138
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 79 ttggatcccgccttgcatcaaatgaatcgga 109
||||||||||||||||||||| |||||||||
Sbjct: 97 ttggatcccgccttgcatcaactgaatcgga 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaacc 37
|||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40
>39832_aly-MIR168a:mirbase
Length = 155
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 79 ttggatcccgccttgcatcaaatgaatcgga 109
||||||||||||||||||||| |||||||||
Sbjct: 103 ttggatcccgccttgcatcaactgaatcgga 133
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 attcgcttggtgcaggtcgggaacc 37
|||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaacc 46
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 81 ggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>40044_ath-MIR168b:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 gcggtctctaattcgcttggtgcaggtcgggaac 36
|||||||| ||||||||||||||||||||||||
Sbjct: 7 gcggtctcggattcgcttggtgcaggtcgggaac 40
>39833_aly-MIR168b:mirbase
Length = 176
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 3 gcggtctctaattcgcttggtgcaggtcgggaac 36
|||||||| ||||||||||||||||||||||||
Sbjct: 31 gcggtctcggattcgcttggtgcaggtcgggaac 64
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 ggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 ggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 ggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 ggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 ggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 ggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 ggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 ggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 81 ggatcccgccttgcatcaaatgaatcggag 110
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
>40271_bna-MIR168:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 tcgcttggtgcaggtcgggaac 36
||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39
