miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41027_pvu-MIR399a:mirbase
          Length = 223

 Score =  210 bits (106), Expect = 2e-55
 Identities = 109/110 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcaataagcaaaccagttatagggcttctctttgttggcaggaaacgacatgaccacttc 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 18  tcaataagcaaaccagttatagggcttctctttgttggcaggaaatgacatgaccacttc 77

                                                             
Query: 61  atgaaatatcttgccaaaggagagttgccctgttgctgctttagcttaat 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  atgaaatatcttgccaaaggagagttgccctgttgctgctttagcttaat 127




>40746_mtr-MIR399p:mirbase
          Length = 79

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 65 aatatcttgccaaaggagagttgccctgt 93
          |||| ||||||||||||||||||||||||
Sbjct: 47 aataacttgccaaaggagagttgccctgt 75




>40742_mtr-MIR399l:mirbase
          Length = 79

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 65 aatatcttgccaaaggagagttgccctgt 93
          |||| ||||||||||||||||||||||||
Sbjct: 47 aataacttgccaaaggagagttgccctgt 75




>41669_vvi-MIR399b:mirbase
          Length = 117

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 70  cttgccaaaggagagttgccctgt 93
           ||||||||||||||||||||||||
Sbjct: 85  cttgccaaaggagagttgccctgt 108




>41154_tcc-MIR399i:mirbase
          Length = 157

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 70  cttgccaaaggagagttgccctgt 93
           ||||||||||||||||||||||||
Sbjct: 115 cttgccaaaggagagttgccctgt 138




>40383_rco-MIR399a:mirbase
          Length = 93

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 70 cttgccaaaggagagttgccctgt 93
          ||||||||||||||||||||||||
Sbjct: 66 cttgccaaaggagagttgccctgt 89




>40094_ath-MIR399c:mirbase
          Length = 114

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 70  cttgccaaaggagagttgccctgt 93
           ||||||||||||||||||||||||
Sbjct: 82  cttgccaaaggagagttgccctgt 105




>39886_aly-MIR399c:mirbase
          Length = 125

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 70  cttgccaaaggagagttgccctgt 93
           ||||||||||||||||||||||||
Sbjct: 87  cttgccaaaggagagttgccctgt 110




>41456_ptc-MIR399i:mirbase
          Length = 108

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 69 tcttgccaaaggagagttgccct 91
          |||||||||||||||||||||||
Sbjct: 76 tcttgccaaaggagagttgccct 98




>42823_zma-MIR399e:mirbase
          Length = 124

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 72  tgccaaaggagagttgccctgt 93
           ||||||||||||||||||||||
Sbjct: 85  tgccaaaggagagttgccctgt 106




>42597_sbi-MIR399i:mirbase
          Length = 121

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 72  tgccaaaggagagttgccctgt 93
           ||||||||||||||||||||||
Sbjct: 82  tgccaaaggagagttgccctgt 103




>41670_vvi-MIR399c:mirbase
          Length = 82

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 72 tgccaaaggagagttgccctgt 93
          ||||||||||||||||||||||
Sbjct: 52 tgccaaaggagagttgccctgt 73




>41249_csi-MIR399d:mirbase
          Length = 130

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 72  tgccaaaggagagttgccctgt 93
           ||||||||||||||||||||||
Sbjct: 100 tgccaaaggagagttgccctgt 121




>42828_zma-MIR399j:mirbase
          Length = 175

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  tgccaaaggagagttgccctg 92
           |||||||||||||||||||||
Sbjct: 154 tgccaaaggagagttgccctg 174




>42827_zma-MIR399i:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 72 tgccaaaggagagttgccctg 92
          |||||||||||||||||||||
Sbjct: 70 tgccaaaggagagttgccctg 90




>42592_sbi-MIR399d:mirbase
          Length = 205

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  tgccaaaggagagttgccctg 92
           |||||||||||||||||||||
Sbjct: 166 tgccaaaggagagttgccctg 186




>42044_osa-MIR399d:mirbase
          Length = 286

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  tgccaaaggagagttgccctg 92
           |||||||||||||||||||||
Sbjct: 256 tgccaaaggagagttgccctg 276




>41676_vvi-MIR399i:mirbase
          Length = 122

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 73  gccaaaggagagttgccctgt 93
           |||||||||||||||||||||
Sbjct: 93  gccaaaggagagttgccctgt 113




>41146_tcc-MIR399a:mirbase
          Length = 136

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 73  gccaaaggagagttgccctgt 93
           |||||||||||||||||||||
Sbjct: 97  gccaaaggagagttgccctgt 117




>40093_ath-MIR399b:mirbase
          Length = 135

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  tgccaaaggagagttgccctg 92
           |||||||||||||||||||||
Sbjct: 105 tgccaaaggagagttgccctg 125




>39885_aly-MIR399b:mirbase
          Length = 154

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  tgccaaaggagagttgccctg 92
           |||||||||||||||||||||
Sbjct: 106 tgccaaaggagagttgccctg 126




>42050_osa-MIR399j:mirbase
          Length = 106

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 tgccaaaggagagttgccct 91
          ||||||||||||||||||||
Sbjct: 76 tgccaaaggagagttgccct 95




>41548_sly-MIR399:mirbase
          Length = 71

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 tgccaaaggagagttgccct 91
          ||||||||||||||||||||
Sbjct: 51 tgccaaaggagagttgccct 70




>41455_ptc-MIR399h:mirbase
          Length = 132

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  cttgccaaaggagagttgccctgt 93
           ||||||||||||||||| ||||||
Sbjct: 101 cttgccaaaggagagtttccctgt 124




>41247_csi-MIR399b:mirbase
          Length = 168

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 72  tgccaaaggagagttgccct 91
           ||||||||||||||||||||
Sbjct: 125 tgccaaaggagagttgccct 144




>41192_aqc-MIR399:mirbase
          Length = 98

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 tgccaaaggagagttgccct 91
          ||||||||||||||||||||
Sbjct: 72 tgccaaaggagagttgccct 91




>40732_mtr-MIR399b:mirbase
          Length = 112

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 70 cttgccaaaggagagttgccctgt 93
          ||||||||||||||| ||||||||
Sbjct: 71 cttgccaaaggagagctgccctgt 94




>40386_rco-MIR399d:mirbase
          Length = 103

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 70 cttgccaaaggagagttgccctgt 93
          ||||||||||||||| ||||||||
Sbjct: 76 cttgccaaaggagagctgccctgt 99