miRNEST 2.0, an integrative microRNA resource :: BLAST
>41027_pvu-MIR399a:mirbase
Length = 223
Score = 250 bits (126), Expect = 2e-67
Identities = 129/130 (99%)
Strand = Plus / Plus
Query: 1 gatattatagtcaataagcaaaccagttatagggcttctctttgttggcaggaaacgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 8 gatattatagtcaataagcaaaccagttatagggcttctctttgttggcaggaaatgaca 67
Query: 61 tgaccacttcatgaaatatcttgccaaaggagagttgccctgttgctgctttagcttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tgaccacttcatgaaatatcttgccaaaggagagttgccctgttgctgctttagcttaat 127
Query: 121 atgtaatctt 130
||||||||||
Sbjct: 128 atgtaatctt 137
>40746_mtr-MIR399p:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 75 aatatcttgccaaaggagagttgccctgt 103
|||| ||||||||||||||||||||||||
Sbjct: 47 aataacttgccaaaggagagttgccctgt 75
>40742_mtr-MIR399l:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 75 aatatcttgccaaaggagagttgccctgt 103
|||| ||||||||||||||||||||||||
Sbjct: 47 aataacttgccaaaggagagttgccctgt 75
>41669_vvi-MIR399b:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 cttgccaaaggagagttgccctgt 103
||||||||||||||||||||||||
Sbjct: 85 cttgccaaaggagagttgccctgt 108
>41154_tcc-MIR399i:mirbase
Length = 157
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 cttgccaaaggagagttgccctgt 103
||||||||||||||||||||||||
Sbjct: 115 cttgccaaaggagagttgccctgt 138
>40383_rco-MIR399a:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 cttgccaaaggagagttgccctgt 103
||||||||||||||||||||||||
Sbjct: 66 cttgccaaaggagagttgccctgt 89
>40094_ath-MIR399c:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 cttgccaaaggagagttgccctgt 103
||||||||||||||||||||||||
Sbjct: 82 cttgccaaaggagagttgccctgt 105
>39886_aly-MIR399c:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 cttgccaaaggagagttgccctgt 103
||||||||||||||||||||||||
Sbjct: 87 cttgccaaaggagagttgccctgt 110
>41456_ptc-MIR399i:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 tcttgccaaaggagagttgccct 101
|||||||||||||||||||||||
Sbjct: 76 tcttgccaaaggagagttgccct 98
>42823_zma-MIR399e:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccctgt 103
||||||||||||||||||||||
Sbjct: 85 tgccaaaggagagttgccctgt 106
>42597_sbi-MIR399i:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccctgt 103
||||||||||||||||||||||
Sbjct: 82 tgccaaaggagagttgccctgt 103
>41670_vvi-MIR399c:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccctgt 103
||||||||||||||||||||||
Sbjct: 52 tgccaaaggagagttgccctgt 73
>41249_csi-MIR399d:mirbase
Length = 130
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccctgt 103
||||||||||||||||||||||
Sbjct: 100 tgccaaaggagagttgccctgt 121
>42828_zma-MIR399j:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccctg 102
|||||||||||||||||||||
Sbjct: 154 tgccaaaggagagttgccctg 174
>42827_zma-MIR399i:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccctg 102
|||||||||||||||||||||
Sbjct: 70 tgccaaaggagagttgccctg 90
>42592_sbi-MIR399d:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccctg 102
|||||||||||||||||||||
Sbjct: 166 tgccaaaggagagttgccctg 186
>42044_osa-MIR399d:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccctg 102
|||||||||||||||||||||
Sbjct: 256 tgccaaaggagagttgccctg 276
>41676_vvi-MIR399i:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 gccaaaggagagttgccctgt 103
|||||||||||||||||||||
Sbjct: 93 gccaaaggagagttgccctgt 113
>41146_tcc-MIR399a:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 83 gccaaaggagagttgccctgt 103
|||||||||||||||||||||
Sbjct: 97 gccaaaggagagttgccctgt 117
>40093_ath-MIR399b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccctg 102
|||||||||||||||||||||
Sbjct: 105 tgccaaaggagagttgccctg 125
>39885_aly-MIR399b:mirbase
Length = 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccctg 102
|||||||||||||||||||||
Sbjct: 106 tgccaaaggagagttgccctg 126
>42050_osa-MIR399j:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccct 101
||||||||||||||||||||
Sbjct: 76 tgccaaaggagagttgccct 95
>41548_sly-MIR399:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccct 101
||||||||||||||||||||
Sbjct: 51 tgccaaaggagagttgccct 70
>41455_ptc-MIR399h:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 cttgccaaaggagagttgccctgt 103
||||||||||||||||| ||||||
Sbjct: 101 cttgccaaaggagagtttccctgt 124
>41247_csi-MIR399b:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccct 101
||||||||||||||||||||
Sbjct: 125 tgccaaaggagagttgccct 144
>41192_aqc-MIR399:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 tgccaaaggagagttgccct 101
||||||||||||||||||||
Sbjct: 72 tgccaaaggagagttgccct 91
>40732_mtr-MIR399b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 cttgccaaaggagagttgccctgt 103
||||||||||||||| ||||||||
Sbjct: 71 cttgccaaaggagagctgccctgt 94
>40386_rco-MIR399d:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 cttgccaaaggagagttgccctgt 103
||||||||||||||| ||||||||
Sbjct: 76 cttgccaaaggagagctgccctgt 99
