miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41281_ctr-MIR171:mirbase
          Length = 371

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                
Query: 38 caaggtattggcgcgcctcaatttgaagacatggttaa 75
          |||||||||||||||||||||||| ||||| |||||||
Sbjct: 39 caaggtattggcgcgcctcaatttaaagacgtggttaa 76




>40696_mtr-MIR171b:mirbase
          Length = 94

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 38 caaggtattggcgcgcctcaatttgaagacatgg 71
          ||||||||||||||||||||||||||| ||||||
Sbjct: 3  caaggtattggcgcgcctcaatttgaatacatgg 36



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                            
Query: 88  ccatgtagttttaattgagccgcgtcaatatct 120
           ||||||||||| | |||||||||||||||||||
Sbjct: 59  ccatgtagtttga-ttgagccgcgtcaatatct 90




>41623_vvi-MIR171b:mirbase
          Length = 99

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 40 aggtattggcgcgcctcaatttgaagacatggtta 74
          ||||||||||| |||||||||| ||||||||||||
Sbjct: 8  aggtattggcgtgcctcaatttaaagacatggtta 42



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 attgagccgcgtcaatatctc 121
           |||||||||||||||||||||
Sbjct: 71  attgagccgcgtcaatatctc 91




>42553_sbi-MIR171h:mirbase
          Length = 81

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 attgagccgcgtcaatatctc 121
           |||||||||||||||||||||
Sbjct: 61  attgagccgcgtcaatatctc 81




>41989_osa-MIR171i:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 attgagccgcgtcaatatctc 121
           |||||||||||||||||||||
Sbjct: 90  attgagccgcgtcaatatctc 110




>42773_zma-MIR171m:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 attgagccgcgtcaatatct 120
           ||||||||||||||||||||
Sbjct: 63  attgagccgcgtcaatatct 82




>42772_zma-MIR171l:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 attgagccgcgtcaatatct 120
           ||||||||||||||||||||
Sbjct: 59  attgagccgcgtcaatatct 78